Basic Information

Insect: Tricholauxania praeusta
Gene Symbol: -
Assembly: GCA_949775025.1
Location: OX459028.1:142612275-142618064[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 6.7e-05 0.0088 17.7 1.3 1 23 294 316 294 316 0.98

2 20 0.00024 0.031 16.0 0.1 1 23 322 345 322 345 0.97

3 20 6.2e-05 0.0081 17.8 3.4 1 23 353 375 353 375 0.98

4 20 0.0011 0.15 13.8 5.0 2 23 381 402 380 402 0.97

5 20 0.0043 0.56 12.0 3.9 1 23 479 501 479 501 0.97

6 20 0.019 2.5 10.0 1.1 1 23 507 530 507 530 0.90

7 20 7.2e-06 0.00094 20.7 0.6 1 23 538 560 538 560 0.98

8 20 5.4e-05 0.0071 18.0 3.0 1 23 565 587 565 587 0.99

9 20 0.07 9.1 8.2 3.1 1 23 698 720 698 720 0.95

10 20 0.002 0.26 13.1 1.3 1 23 726 748 726 748 0.97

11 20 4.3e-05 0.0056 18.3 1.2 1 23 756 778 756 778 0.98

12 20 0.00053 0.069 14.9 3.6 1 23 787 809 787 809 0.99

13 20 0.0013 0.17 13.6 0.3 1 23 815 838 815 838 0.96

14 20 0.00011 0.015 17.0 0.7 2 23 844 865 843 865 0.96

15 20 2.3e-05 0.0029 19.2 1.0 1 23 871 893 871 893 0.95

16 20 1.5 2e+02 4.0 1.0 1 23 899 921 899 922 0.81

17 20 4.1e-05 0.0054 18.4 1.9 1 23 927 950 927 950 0.97

18 20 0.0013 0.17 13.6 2.7 1 23 956 978 956 978 0.99

19 20 8.6e-07 0.00011 23.6 0.6 1 23 984 1006 984 1006 0.99

20 20 0.00022 0.028 16.1 1.2 1 23 1012 1034 1012 1034 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	6.7e-05	0.0088	17.7	1.3	1	23	294	316	294	316	0.98
2	20	0.00024	0.031	16.0	0.1	1	23	322	345	322	345	0.97
3	20	6.2e-05	0.0081	17.8	3.4	1	23	353	375	353	375	0.98
4	20	0.0011	0.15	13.8	5.0	2	23	381	402	380	402	0.97
5	20	0.0043	0.56	12.0	3.9	1	23	479	501	479	501	0.97
6	20	0.019	2.5	10.0	1.1	1	23	507	530	507	530	0.90
7	20	7.2e-06	0.00094	20.7	0.6	1	23	538	560	538	560	0.98
8	20	5.4e-05	0.0071	18.0	3.0	1	23	565	587	565	587	0.99
9	20	0.07	9.1	8.2	3.1	1	23	698	720	698	720	0.95
10	20	0.002	0.26	13.1	1.3	1	23	726	748	726	748	0.97
11	20	4.3e-05	0.0056	18.3	1.2	1	23	756	778	756	778	0.98
12	20	0.00053	0.069	14.9	3.6	1	23	787	809	787	809	0.99
13	20	0.0013	0.17	13.6	0.3	1	23	815	838	815	838	0.96
14	20	0.00011	0.015	17.0	0.7	2	23	844	865	843	865	0.96
15	20	2.3e-05	0.0029	19.2	1.0	1	23	871	893	871	893	0.95
16	20	1.5	2e+02	4.0	1.0	1	23	899	921	899	922	0.81
17	20	4.1e-05	0.0054	18.4	1.9	1	23	927	950	927	950	0.97
18	20	0.0013	0.17	13.6	2.7	1	23	956	978	956	978	0.99
19	20	8.6e-07	0.00011	23.6	0.6	1	23	984	1006	984	1006	0.99
20	20	0.00022	0.028	16.1	1.2	1	23	1012	1034	1012	1034	0.98

Sequence Information

Coding Sequence: aTGGACAGCTCAGAACAAGTCTTGGAAAAAATGTGTCGCGCCTGTATgtgcaaaaatcaaaactttcacTCATTGTATGATGAAGCTGCGGACAGGCCATTAACAATATGTGAAATGTTTTCCACAACGTTGCCACAGCTCCCCATTCATAGCAATGATGAGCTCTCCAAATTAATTTGTGTAACATGCTTGAACACACTTATCATCGTCCATAAATTCCAAGAAATGTGTATTGCATCGGACACATACATGCGAAGTTTACTAGCCAGCAGTAGACTCTCATGTCTCGATACTAAGACGGAGCAGCTGGAGGAAATTAAGCATATAGCAATAGCGCAAGGTGTCGCCAAATTTGATTACATACCACTTGTGACGGAGGATCCGTTACAATTGCCAGGCtcaataaaagtcgaaaaaaattgtgatgCAGTCAATTATCATGACAATGATAACAGGGATTCGGAATGGAGTGACGGTGATGACAGaccgTTAAAAGATATTACGCCTCTGACGGGAGAGttgcaaaatttcataaaattcgaAATCAGTGAAGTGGAAGTACAGGAATGTGATACGAAGGcatttttgaatacaaaaaatgaTATGGACTATGGCATGGGTACAGCTGCAGATTTGAGTGTCGGTGCTGTGAGGAAAGTTGGATTGTATGATGATGATATTACGGTTACGGCTTCAGAAACTGATCACACTGACACCGCTTCAGAGTGGAGTGCCGGTGATGATAGTGACTATGAAGAAAAACCAAAGCAAAAATTACGCAAAActgagcaacaacagcaaagcaCATCCAGTATTATGAATGAAaccaaaatatatgaaattgaaaaACCTCATTCCCAACCTCGTcgtaaatatcattttcgctgCCATCTCTGTGATGCTGGTTTTGCGAGCAACTACAAATTAAAGCAACATGCTCGGGTACATCTTGAAACGAATTcatttgtttgtaaaatgtgtaGTTATCGCTATAAAACCAGTGGAGCACTTGCACTGCACATTAATATCGCACATGAATTGTCTCCGCCTGAGGGTCATAAATGTTCAAAGTGTCCAAGACGGTTTGAAAAACGTAAGTCATTAGTTGCGCACATGAGTACCCACCGCGATACACTTTTGAAATGTAAGTGGTGTACCAGAAAATTCACAAAGTTAAAAACGCTGTTGCATCATGTACGCACACATCCAGAATCGTATTCGTATTCTGTGTCTTTTATATCCTGCCAGAATACAGAGCCTCACCTGGAAtacaaagaaagaaaatttgaaCACGATGATGATTTCCAGTGGAGTGCCGATGATGATATTAGTTACTTCCCTGGGAAAGCCCCTACTAACAAATCAAACAAAGCTCATATAGGAAGTGTAGATGAAATTGAAAAACCTAATTCACGCTCttgcagaaaattttattttcattgcccgcatTGTGACGCAGGTTTCGCTAGCGACTACAAGTTAAAGCATCATGCTCGCTTACATCTTAAAACACGTCCATTCGCTTGCGAAATATGCAACTATCGCTTTAAAACCGGTAAAACCTTGGCATACCACAAAACACTCACACATGAAATGTCAACCTCTGAAGGTTTCAAATGTCCAGAGTGCCCAAGACGTTTTGAAAAACGTGAGTCATTGGTTTCCCACATGAAAGATCATCGCCAGCCACTTTTCAAATGCAAtttgtgttcaaaaaaatttaaaaaactaaaagagcTGTTGAATCATGCGCGTACACATCCAGTGAATCAAAAATATACATCTGACCACGATGTTGCTAACAAGGCTACAGCTTCAGAGTGCAGTGCAGTTGTTGACATtgaccAAGCGAAATCTAGTTccgaaataacaaaaacagAGCAGCAGGAAAATACACCCAGCACTTATAACGAAGAAAGCGTAAAGGATTTCGGTAAACAACCAAGAAAATCCAGTATTGATAACCTTACGGacgaaaaagaaattgaaaaACTCAAAACAGAGCAACAGCCGAATGCATCGAGTACTAGTAACGAAACCAGCGtatatgaaattgaaaaGCCTTATTCACAACCTCGTcgtaaatatcattttcgctgTCAACATTGTAATGCAGGCTTTGCTAGTGACTACAAGTTAAAGCTTCATGCTCATTTACATCTTGAGTCGCGTCAATTTGCATGTGAAGTTTGCAATTATCGCTATAGAACCGCTAAAGCATTGGCACTCCACAAACATACACATGAAACGCCTCCACCAGATGGTTTTAAATGCCCAGACTGTCCAAGacgttttgaaaaacttagatCATTATCATCGCATCTAAAAAACCATTTCATAACAGatccaaaagaattttttaaatgtcgtTTGTGcccgaaaaaattcaaaaagtttattacactAACGCAGCATGAGCGCACACATTCAGAAATTCAAAAACATAGCTGTAACTTGTGTGAAGAAGTATTTGAACTGAGTGCTCAACTTGAAGATCACATAAATAAGAACCATGGCTTGAAATCTCTCATATGTCAATATTGTAAAAAAGTGCTTAGAAACAAGTCCAGTCTCGAGATTCATGAACGCCAACATACTGATGAAAAACCATTTCTTTGTCCACAATGCGGTAAATCGTTACGAACTAAAAAGACTTTGAGTGATCACATGCTGCGTCACTCTGatgtaaaaacttttcaatgccCTGAGTGTCCTAGCAAATTTGCCTGCGACGTTGATCGACGAAAACATCTGCTAATACATCAGGGCACAAAGCCATATGCCTGTGATATTTGCGGTCAAAGGTTTTCTCGTCATGATTCgattaataaacataaaaaaacagttCACATTGGCAAGCGTCAATATAAATGTGGTCAATGTGATATGAcCTTTGCTGTCGTGCATTATTTACACCGCCATGAACGTGTGCATACCGGTGAAAAACCATACAAATGTAAATACTGTGAAAAAGCTTATGCCGATAGCGGTGACTTGACTAAACATTTACGTTTACATGTCGGTGAAAAGACTTACATGTGCGAAGAATgtccagaaaaatttaaatattatgcAGAATTCCGAGAACATCAGCGGTTTCATTACaagcaacaacagaaaaagGTGGTTGGTGCAAAtgtagagaaaaatattttggagagCTAA
Protein Sequence: MDSSEQVLEKMCRACMCKNQNFHSLYDEAADRPLTICEMFSTTLPQLPIHSNDELSKLICVTCLNTLIIVHKFQEMCIASDTYMRSLLASSRLSCLDTKTEQLEEIKHIAIAQGVAKFDYIPLVTEDPLQLPGSIKVEKNCDAVNYHDNDNRDSEWSDGDDRPLKDITPLTGELQNFIKFEISEVEVQECDTKAFLNTKNDMDYGMGTAADLSVGAVRKVGLYDDDITVTASETDHTDTASEWSAGDDSDYEEKPKQKLRKTEQQQQSTSSIMNETKIYEIEKPHSQPRRKYHFRCHLCDAGFASNYKLKQHARVHLETNSFVCKMCSYRYKTSGALALHINIAHELSPPEGHKCSKCPRRFEKRKSLVAHMSTHRDTLLKCKWCTRKFTKLKTLLHHVRTHPESYSYSVSFISCQNTEPHLEYKERKFEHDDDFQWSADDDISYFPGKAPTNKSNKAHIGSVDEIEKPNSRSCRKFYFHCPHCDAGFASDYKLKHHARLHLKTRPFACEICNYRFKTGKTLAYHKTLTHEMSTSEGFKCPECPRRFEKRESLVSHMKDHRQPLFKCNLCSKKFKKLKELLNHARTHPVNQKYTSDHDVANKATASECSAVVDIDQAKSSSEITKTEQQENTPSTYNEESVKDFGKQPRKSSIDNLTDEKEIEKLKTEQQPNASSTSNETSVYEIEKPYSQPRRKYHFRCQHCNAGFASDYKLKLHAHLHLESRQFACEVCNYRYRTAKALALHKHTHETPPPDGFKCPDCPRRFEKLRSLSSHLKNHFITDPKEFFKCRLCPKKFKKFITLTQHERTHSEIQKHSCNLCEEVFELSAQLEDHINKNHGLKSLICQYCKKVLRNKSSLEIHERQHTDEKPFLCPQCGKSLRTKKTLSDHMLRHSDVKTFQCPECPSKFACDVDRRKHLLIHQGTKPYACDICGQRFSRHDSINKHKKTVHIGKRQYKCGQCDMTFAVVHYLHRHERVHTGEKPYKCKYCEKAYADSGDLTKHLRLHVGEKTYMCEECPEKFKYYAEFREHQRFHYKQQQKKVVGANVEKNILES

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -