Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: stc
Assembly: GCA_000599845.3
Location: NW:1874234-1884004[+]

Transcription Factor Domain

TF Family: zf-NF-X1
Domain: zf-NF-X1 domain
PFAM: PF01422
TF Group: Zinc-Coordinating Group
Description: This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 1 1.2e+04 -4.4 1.6 15 19 574 578 573 578 0.81

2 15 0.19 2.4e+03 -1.8 0.2 4 10 607 613 606 614 0.92

3 15 3.7e-07 0.0047 16.4 13.6 4 19 621 636 619 636 0.93

4 15 0.95 1.2e+04 -4.0 0.9 6 10 662 666 661 667 0.87

5 15 4e-05 0.5 9.9 13.9 3 19 674 690 672 690 0.91

6 15 5.8e-10 7.2e-06 25.4 13.5 1 19 728 746 728 746 0.98

7 15 0.24 2.9e+03 -2.1 2.9 5 11 775 781 775 782 0.90

8 15 0.0001 1.3 8.6 12.7 4 19 793 808 786 808 0.87

9 15 1 1.2e+04 -4.5 1.4 5 10 837 842 837 842 0.91

10 15 0.0066 82 2.9 11.1 1 11 848 858 848 870 0.89

11 15 7.7e-11 9.6e-07 28.2 11.8 1 19 875 893 875 893 0.98

12 15 0.7 8.7e+03 -3.6 1.1 6 10 922 926 921 926 0.86

13 15 0.31 3.9e+03 -2.5 2.9 15 19 946 950 945 950 0.90

14 15 0.00019 2.3 7.8 19.6 1 18 986 1004 976 1009 0.82

15 15 9.9e-07 0.012 15.1 13.1 1 19 1015 1034 1015 1034 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	1	1.2e+04	-4.4	1.6	15	19	574	578	573	578	0.81
2	15	0.19	2.4e+03	-1.8	0.2	4	10	607	613	606	614	0.92
3	15	3.7e-07	0.0047	16.4	13.6	4	19	621	636	619	636	0.93
4	15	0.95	1.2e+04	-4.0	0.9	6	10	662	666	661	667	0.87
5	15	4e-05	0.5	9.9	13.9	3	19	674	690	672	690	0.91
6	15	5.8e-10	7.2e-06	25.4	13.5	1	19	728	746	728	746	0.98
7	15	0.24	2.9e+03	-2.1	2.9	5	11	775	781	775	782	0.90
8	15	0.0001	1.3	8.6	12.7	4	19	793	808	786	808	0.87
9	15	1	1.2e+04	-4.5	1.4	5	10	837	842	837	842	0.91
10	15	0.0066	82	2.9	11.1	1	11	848	858	848	870	0.89
11	15	7.7e-11	9.6e-07	28.2	11.8	1	19	875	893	875	893	0.98
12	15	0.7	8.7e+03	-3.6	1.1	6	10	922	926	921	926	0.86
13	15	0.31	3.9e+03	-2.5	2.9	15	19	946	950	945	950	0.90
14	15	0.00019	2.3	7.8	19.6	1	18	986	1004	976	1009	0.82
15	15	9.9e-07	0.012	15.1	13.1	1	19	1015	1034	1015	1034	0.97

Sequence Information

Coding Sequence: ATGGCATCCTGGGACGGATCCTACGATCCAGACAACGTAGATTATTATGTTGAACCTAGCATCAATGTTCCTCCGGACCAATGGAACGGATTTCTTGGCAATCGATTTGCACAGAACGCTGTCCCTTACCCTATGAATTATTATGGCTATGAACAGAATGCACAATATTATAATCTAGTGGATGacaatgatttttcacgaTCAATAGCAAACATGCCTATTAACAATGGTATTTACACCAATAATGGATTTCCTCCTATTGATGATGTTCACGCAATGCCCACTGAACCAACTATGTCAACAATCGGTTATTTTCATGGACTTGGCCCTCCACCACCAGAAGTTCAGCCACAAACTTACAGtcaaaataatgtatattttcaaaataataagcaTGAAGATAAAAACAATAAGACTGAATCCTTAAACTTTGGAAATAGTGATTCTCAAGCTTCAGAAGTTCAGTCACAAAATCATAGccaaaataaaacattttttcagaatagTAAGCACAAAAACAACAAGAATCAAAAgactgaaacaaaaaaagattcaaatgTTGGAACAAATACTGATGAGCTTCCAATTAATCAAAAACATGATCATACAAATTCCAATAATTATGGAAGAAATAAGAGTGattatcaaaacaaaaatattggtaaatcaaatgttttttttgaaaataacatgccaaaatataatgaaagaaGATTTGAATACAGGGATAACAGAAGAAAGCAGAATACCGATCATTTCAAAGATAAcaataagaaagaaaatgaaaaacctGTTTATAGCAAACgagaaaagtcaaaaaagtaTTCTCGTAACAATAAACTGTTTACGAATGATGTAGAAAATTCAGCTTGTGCAATTGAGGAAGACAAAAAACATTCAAGTACAAACATGAATGATCTTGAAACTAATATGTCTTTTTCCAAACCAGAACAAGTATTACTTGGCCTTGACAAAACAGAGAGagttttcgaaaattcgagTAATGATAAAGAACAGAAATATAACAAAAGGAGGGATACAAGGGATCCCAGAGATCCAAGAGATTCTAGAGATCCTAGAGATCCAAGAGATTCTAGAAATTCTAAAGATCCAAGAGATTCTAGAAATCCTAGAGATCCAAGAGATTCTAGAAATCCTAGAGATCCAAGAGATTTTAGAGATTCTAGAAATTCTAGAGATCCAAGACATTTCAAAGATTCTAGAGATTCATGGAATCACAGAGACACTAGGGATCCAAAGGATTATAAGGATACTAGAGACCCAAGGGAGTATAGAGATACTAGAGATCCAAGGGATTATAGAGACCCTTTAGATTCAAAAGATCCTAGGGAATCCAGAGATGTTAGGGATTCAACAGATCCCAGGGAATCAAGAGAAGGAGCTTACCGCTTTGGAAGAAACAAGAGATTTGAAAGACGggaaaataacaataaaagttCCACTGATTGGAGACAAAAACCTAGCATGAATAATAAAGTATCTCTTCTGCAACAGAAAGCTAAGGAAATTGATTATGaTGTGAGCCAAAGAGAAAGATTGACAGAGCAACTTAACCGAGGAAATTTAGAGTGTTTGGTTTGTTGTGATTCAATTAGACAAACTGATTATGTTTGGTCATGTTATAACTGCTATCATGTGCttcatttaaaatgtgttCAAAAATGGGCTAAGTCATCTCAAGATGatagTGGATGGCGATGCCCTGCCTGCCAAAATGTTACTACATCTGTTCCTTCTGAATATAGATGTTTTTGTGGCAAAGAAAAGAACCCAGATTGGAATCGTCGAGATGTAGCACATTCTTGTGGTGAAATGTGCAGTCGTTCAAATGGTTGTGTTCATAAGTGCACACTTTTATGCCATCCAGGATCTTGTCCACCTTGCACAGTCAGAGTCTCAAAATTATGTGGTTGCGAACGCACAACTCAGACACAAATTTGTAGTACAGCATTGCTTGTACAATGTAGTGAAACATGCGATAAAGTTCTTAATTGCATGGTGCACAAATGTGAAAAACAATGTCACCATGGAAGTTGTgatgaatgtaaaaaacatATTGACCAAGAGTGCTTCTGTGGAAAAAATAACCGTACCCAAGTATGCATTCCAAATCTTTCTTCAAATTATTCATGCGGGGACATTTGCAGTAAACTTTTGGATTGTGGCAATCACAAATGCAGTAACATTTGTCATTCGGGAAGTTGTGAACCTTGCAAATTAAAACCTGAATCAGTGACTCATTGCTGCTGTGGACAAACTCCTATAAGCactgaaagaaaaagttgtctAGATCCGGTCCCCACATGTGATAAAGTTTGCTGCCGAATTTTCAAATGTGGCACACCTTcAAATCCACATTTCTGTCCTGAAAACTGCCATACAGGCGATTGTCCTAAATGTAAATTAAGTACAACATGCAAATGTCGCTGTGGCTTTATGGATAAAGATATTCCCTGTGAAGAACTCAGTGCTAGATCTGGGGATGTTCGTTGCAACAAAAAGTGTACCAAAAAGCGCTCATGTGGAAAACACAAATGTAATCAGATGTGTTGTATCGATATCGATCACATATGTCCTTTACCTTGCTCTAAAACGTTAAGTTGTGGaaaacataaatgtgaacAAACTTGTCACAAAGGGTTTTGTCAGCCATGCTGGAGATCGAGTTTCACCGAGCTGTACTGCGAGTGTGGCAAGGCTGTAATATTCCCGCCGGTACCTTGTGGAACTCGTCGGCCTGCTTGCAAAGAGCCATGTTCCAGGACGCACGATTGCGATCACCAAGTTCTGCACCCGTGCAATAGCGATTCGGTATGTCCTCCGTGCTCGGTTCTCACCCAGAAGTGGTGTCATGGCAAACACGAATTGCGCAAGGCGGTACCCTGCCACGTCAAGGAATTATCTTGTGGTCTACCTTGTGGAAAGCCCATTCCTTGCAATCGACATAAATGCATACAAAAATGTCATTCAGGTCCTTGTGCTACAGAATGCACACAACCTTGTCAGGAGATAAGAAAAATGTGCGGGCACATTTGCGCAGCTCCTTGCCACGAAGGTGATTGTCCTGATACACCGTGCAAAGTGATGGTTAAGGTCACTTGCCAATGTGGTCACCGTACGATGACTCGACAATGCGCTGAAAATTCTCGTGATTATCAACGAATTGCCAGCGGTATGCTAGCTAGTAAAATGGCTGATGTTCAATTGGGTCACTCAATAGATCTAGAAGAAGTTTTTGGTCAGGggtcaaaaaaacaaaatcaattgaaaactCTCGAATGTAATGACGAATGCAAAGTTATCGAGCGTAATAGACGCTTGACACTAGGCTTACAAATTGTTAATCCGGACTTGAGTGGCAAACTTATGCCAAAATACAGCGACTACATGAAACAATGGGCCAAAAAAGATGCAGCTTTTTGTAATATGGTTCACGATAAGCTTACCGAGCTCGTCCAGCTGGCTAAATCTTCGAAACAAAAATCGCGCAGCTACTCATTCGAAGTTATGAATCGCGATAAAAGACAGTTTGTTCACGAAATGTGTGACCATTTTGGATGTGAAAGTCAGGCTTATGACCAAGAACCCAAAAGAAACGTAGTTGCTACAGCCGTTAAAGAGAAGtGTTGGTTACCCAGTTACAGCCTGGTAGAATTAGTGAGAAGAGAAAACGGACAACGAAAAGTACCAGGACCTATGTTGAATAAGTTATTGGCTTCAGAAAGGAGTATGGGCTCTTTACAGCTGAATACTAAAAGTCTCAGAACCTCTGCACCCACAACTCCAATTTCGCCGTCGAGGTCTCCAGAACCCGaaatagattattttaattacaagGGTTGA
Protein Sequence: MASWDGSYDPDNVDYYVEPSINVPPDQWNGFLGNRFAQNAVPYPMNYYGYEQNAQYYNLVDDNDFSRSIANMPINNGIYTNNGFPPIDDVHAMPTEPTMSTIGYFHGLGPPPPEVQPQTYSQNNVYFQNNKHEDKNNKTESLNFGNSDSQASEVQSQNHSQNKTFFQNSKHKNNKNQKTETKKDSNVGTNTDELPINQKHDHTNSNNYGRNKSDYQNKNIGKSNVFFENNMPKYNERRFEYRDNRRKQNTDHFKDNNKKENEKPVYSKREKSKKYSRNNKLFTNDVENSACAIEEDKKHSSTNMNDLETNMSFSKPEQVLLGLDKTERVFENSSNDKEQKYNKRRDTRDPRDPRDSRDPRDPRDSRNSKDPRDSRNPRDPRDSRNPRDPRDFRDSRNSRDPRHFKDSRDSWNHRDTRDPKDYKDTRDPREYRDTRDPRDYRDPLDSKDPRESRDVRDSTDPRESREGAYRFGRNKRFERRENNNKSSTDWRQKPSMNNKVSLLQQKAKEIDYDVSQRERLTEQLNRGNLECLVCCDSIRQTDYVWSCYNCYHVLHLKCVQKWAKSSQDDSGWRCPACQNVTTSVPSEYRCFCGKEKNPDWNRRDVAHSCGEMCSRSNGCVHKCTLLCHPGSCPPCTVRVSKLCGCERTTQTQICSTALLVQCSETCDKVLNCMVHKCEKQCHHGSCDECKKHIDQECFCGKNNRTQVCIPNLSSNYSCGDICSKLLDCGNHKCSNICHSGSCEPCKLKPESVTHCCCGQTPISTERKSCLDPVPTCDKVCCRIFKCGTPSNPHFCPENCHTGDCPKCKLSTTCKCRCGFMDKDIPCEELSARSGDVRCNKKCTKKRSCGKHKCNQMCCIDIDHICPLPCSKTLSCGKHKCEQTCHKGFCQPCWRSSFTELYCECGKAVIFPPVPCGTRRPACKEPCSRTHDCDHQVLHPCNSDSVCPPCSVLTQKWCHGKHELRKAVPCHVKELSCGLPCGKPIPCNRHKCIQKCHSGPCATECTQPCQEIRKMCGHICAAPCHEGDCPDTPCKVMVKVTCQCGHRTMTRQCAENSRDYQRIASGMLASKMADVQLGHSIDLEEVFGQGSKKQNQLKTLECNDECKVIERNRRLTLGLQIVNPDLSGKLMPKYSDYMKQWAKKDAAFCNMVHDKLTELVQLAKSSKQKSRSYSFEVMNRDKRQFVHEMCDHFGCESQAYDQEPKRNVVATAVKEKCWLPSYSLVELVRRENGQRKVPGPMLNKLLASERSMGSLQLNTKSLRTSAPTTPISPSRSPEPEIDYFNYKG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01484338;
90% Identity: iTF_01483535; iTF_01484338;
80% Identity: -