Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: ZNF341
Assembly: GCA_000599845.3
Location: NW:1390339-1394454[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.5 8.1 6.6 3.7 1 23 45 67 45 67 0.98

2 13 0.00075 0.012 15.5 3.9 1 23 248 270 248 270 0.99

3 13 8.5e-07 1.4e-05 24.8 0.4 1 23 276 298 276 298 0.98

4 13 0.041 0.67 10.0 1.3 1 23 323 346 323 346 0.96

5 13 0.11 1.8 8.7 0.2 1 23 352 376 352 376 0.98

6 13 0.001 0.017 15.1 1.8 1 23 381 403 381 403 0.99

7 13 0.017 0.27 11.3 4.0 1 23 415 439 415 439 0.91

8 13 0.00085 0.014 15.3 2.0 1 23 441 463 441 463 0.98

9 13 2.2e-05 0.00036 20.3 0.2 1 23 469 491 469 491 0.96

10 13 1.4e-05 0.00022 21.0 1.3 1 23 497 519 497 519 0.98

11 13 0.046 0.75 9.9 0.7 5 23 534 552 525 552 0.79

12 13 0.28 4.6 7.4 9.2 1 23 558 581 558 581 0.95

13 13 0.014 0.24 11.5 1.9 2 19 584 601 583 604 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.5	8.1	6.6	3.7	1	23	45	67	45	67	0.98
2	13	0.00075	0.012	15.5	3.9	1	23	248	270	248	270	0.99
3	13	8.5e-07	1.4e-05	24.8	0.4	1	23	276	298	276	298	0.98
4	13	0.041	0.67	10.0	1.3	1	23	323	346	323	346	0.96
5	13	0.11	1.8	8.7	0.2	1	23	352	376	352	376	0.98
6	13	0.001	0.017	15.1	1.8	1	23	381	403	381	403	0.99
7	13	0.017	0.27	11.3	4.0	1	23	415	439	415	439	0.91
8	13	0.00085	0.014	15.3	2.0	1	23	441	463	441	463	0.98
9	13	2.2e-05	0.00036	20.3	0.2	1	23	469	491	469	491	0.96
10	13	1.4e-05	0.00022	21.0	1.3	1	23	497	519	497	519	0.98
11	13	0.046	0.75	9.9	0.7	5	23	534	552	525	552	0.79
12	13	0.28	4.6	7.4	9.2	1	23	558	581	558	581	0.95
13	13	0.014	0.24	11.5	1.9	2	19	584	601	583	604	0.94

Sequence Information

Coding Sequence: ATGTCACAAGAGATATTCGATGCACTATCTGGTGTATCGTTGGATGGTTCGTCGGTACAAGCACTATTTGCAACTCAGACTTTAATTAGTGAAGTTGAGCAGTcagCAATCAATCAGGAAGAAGATGATTTATTCCAGTGTGGCAAGTGCAGAAGTCAGTTTACATCTCTGCACCTGTTTGTACTACATAAGAGGGAGCATTCAAAAATTCCAGATCAAAAAGTAGACTTGAGTCAGTATTTAGTAAACAACGATAGTCATGTAGCTCAAGCTGATTGTAATAATGGACAAGATAGTGATAGCTGTAATGATTACAATCCTGACGGGCACTTTGGTCAATCGCACCAACTCAATGAGCCTATTATTTTggaagaaaatgatttattattcagTATGGATGCTGATGATGTTGGCTATTTTACTTCCGATGCTAATTTTGGTGTCCCTATAATTTTAAGCAATGGTGATTTGGAAACATTCGTTGATTCACCTTTAACTGGATCGACGGATGATTTCTTAAGCGaagaaaacaatgaaataCCAGTGTTGAAAAGTGATACAAACCAGAATTTAGAATCTACTCCAGATCTAGATATATCAAATGATAACCATCAAGAAACAAAACATCTTGATAATCTGAAAATAGATGATCAGGTAGTTACTAAAACTGATCCCAGTAATTCAAATGAACAAGATGTTAATGAACGAGAAAACAAGTCTGGTCAAACACAAAATTTAAAGTACAAGTGTAGCTACTGCCAAAAGCAatttgccaaaaaattttactggcAACAACATGAACGCTCTCATACAGGAGAAAAGCCATATCAATGTGTAGTTTGTGGTAGACCATTTGCTCAAAAatcgaatgtaaaaaaacatatgtcTTCGCACAAAGTCTGGCCAGGAACAGCAATTCATTCCTTGCCTCCAGAAGCTCCTGTTGATGGAAGCATCGAGCGCTCGTATCATTGTCAGTTTtgtaaagaaatatttgattCCTACAAGGCTTTAAAAGGCCACCTTATTGTTTCGCATTTAACTCTGAAGGTTTATAAATGCGTGCAATATGGTTGCGGCTCGATGTTTGCAGAGCTTGAAGATTTTCTCGAGCATACGCGCAGTCACAAATGTGCAGAATATCGATGTCATATATGTGGTGACGTTTTTGTTACACTTAATGATCTCGGTCAACATCAACATACGCATTCCgtccaaaaacaaaaaactacCGAAAAgTATTACTGTTGTACGGTGTGCAAGTCCTCATTCTCTAATTTAGAAGCTCTTCAGCATCACACAGAAACTACTACTCATGATTACGCTTGTCCTCACTGTGGCAAAAGCTTTTTGATCGAACGTTTTCTTCGACGGCATCTAAAAACCCATGCTTCATCAGCTCGTTTCGCCTGCGAGGATTGCGGCAAAGCCTTTAAAACCGAGCAATATCTTGCTAATCATAAACTCATTCACAGCGAAGAAACTCCTTATACCTGTCCACACTGTCCGGCACGGTTCAAACGTAAAGATCGACTTGGTCGTCACATGTTGATCCATGATTTGACCAAACGGCTTAAATGTCCTTATCGTGGCCACCTTGGTTGTATGAGTGAATTTTCACGTCCAGATAAACTCAAACGTCACTTATTGACGCACAGTAATGTTAAGCGTTTTAGTTGTTCGCACTGCAGTCGTCATTTTCATCGCGCTCAGGCATTAAAACATCATGAGCTCAGTAAACACAACGTCAAGTGCGAAGTTTGCTCACATGCATTTAAAACTAAAGATCAGTTACTGAGTCACAATTGTGAGCAATCAActattgatttgaaaaaacacaCAACGAGCTCGCAGTTACCGAAGAAAGCGTCAGGGTCGTTTAAACCACGAAGGCCGACTCCTAAACGTCAAATACCTTCCAAAACGACTCAAACTGCATCTCCATCTACGACCACTCCGCCAATTACCCCTGAAAAAGAACATAAGGAAACGCCCAAAActgatgaaataataaaaaagATGCCTGTGGAATTACCAAAAACTGAACCGAAAATCGATGATGATATCGATTCCAAAATTGATCTAGATTTTGATTTAAGCAATGAAGGATCGTTAATTTTAGacactttttaa
Protein Sequence: MSQEIFDALSGVSLDGSSVQALFATQTLISEVEQSAINQEEDDLFQCGKCRSQFTSLHLFVLHKREHSKIPDQKVDLSQYLVNNDSHVAQADCNNGQDSDSCNDYNPDGHFGQSHQLNEPIILEENDLLFSMDADDVGYFTSDANFGVPIILSNGDLETFVDSPLTGSTDDFLSEENNEIPVLKSDTNQNLESTPDLDISNDNHQETKHLDNLKIDDQVVTKTDPSNSNEQDVNERENKSGQTQNLKYKCSYCQKQFAKKFYWQQHERSHTGEKPYQCVVCGRPFAQKSNVKKHMSSHKVWPGTAIHSLPPEAPVDGSIERSYHCQFCKEIFDSYKALKGHLIVSHLTLKVYKCVQYGCGSMFAELEDFLEHTRSHKCAEYRCHICGDVFVTLNDLGQHQHTHSVQKQKTTEKYYCCTVCKSSFSNLEALQHHTETTTHDYACPHCGKSFLIERFLRRHLKTHASSARFACEDCGKAFKTEQYLANHKLIHSEETPYTCPHCPARFKRKDRLGRHMLIHDLTKRLKCPYRGHLGCMSEFSRPDKLKRHLLTHSNVKRFSCSHCSRHFHRAQALKHHELSKHNVKCEVCSHAFKTKDQLLSHNCEQSTIDLKKHTTSSQLPKKASGSFKPRRPTPKRQIPSKTTQTASPSTTTPPITPEKEHKETPKTDEIIKKMPVELPKTEPKIDDDIDSKIDLDFDLSNEGSLILDTF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01484113;
90% Identity: iTF_01484113;
80% Identity: -