Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:357592-363349[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0061 0.45 10.1 2.4 15 44 149 175 143 175 0.89

2 15 3.5 2.6e+02 1.2 0.8 17 29 179 191 177 207 0.73

3 15 0.66 49 3.5 2.0 16 29 206 219 197 231 0.83

4 15 0.14 10 5.7 0.8 18 39 236 254 220 263 0.75

5 15 1.4 1e+02 2.5 1.5 17 36 262 278 250 286 0.73

6 15 0.027 2 8.0 0.3 18 44 291 314 279 314 0.87

7 15 9.7 7.2e+02 -0.2 0.3 18 26 319 327 317 343 0.89

8 15 0.55 41 3.8 0.7 18 43 346 368 334 369 0.80

9 15 0.11 8 6.1 2.2 5 43 362 396 358 397 0.76

10 15 0.03 2.3 7.8 4.5 17 44 537 561 532 561 0.90

11 15 0.42 31 4.2 0.8 18 33 566 578 563 589 0.76

12 15 2.1 1.5e+02 2.0 1.0 9 29 586 605 578 620 0.71

13 15 0.0011 0.085 12.4 0.7 19 44 622 644 617 644 0.94

14 15 0.019 1.4 8.4 0.0 19 44 650 672 647 672 0.94

15 15 0.12 8.8 5.9 2.3 18 44 677 700 674 700 0.87

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0061	0.45	10.1	2.4	15	44	149	175	143	175	0.89
2	15	3.5	2.6e+02	1.2	0.8	17	29	179	191	177	207	0.73
3	15	0.66	49	3.5	2.0	16	29	206	219	197	231	0.83
4	15	0.14	10	5.7	0.8	18	39	236	254	220	263	0.75
5	15	1.4	1e+02	2.5	1.5	17	36	262	278	250	286	0.73
6	15	0.027	2	8.0	0.3	18	44	291	314	279	314	0.87
7	15	9.7	7.2e+02	-0.2	0.3	18	26	319	327	317	343	0.89
8	15	0.55	41	3.8	0.7	18	43	346	368	334	369	0.80
9	15	0.11	8	6.1	2.2	5	43	362	396	358	397	0.76
10	15	0.03	2.3	7.8	4.5	17	44	537	561	532	561	0.90
11	15	0.42	31	4.2	0.8	18	33	566	578	563	589	0.76
12	15	2.1	1.5e+02	2.0	1.0	9	29	586	605	578	620	0.71
13	15	0.0011	0.085	12.4	0.7	19	44	622	644	617	644	0.94
14	15	0.019	1.4	8.4	0.0	19	44	650	672	647	672	0.94
15	15	0.12	8.8	5.9	2.3	18	44	677	700	674	700	0.87

Sequence Information

Coding Sequence: ATGAGAAACATGGACTTCAGTGGTGTATATAACTGTAacgtcagAGTAAAGGAGGAACCAAACGATAATCCCCCGattgaaaatgatgattaTCAGATAATTGACAATGCAAACGATGCGAACACTGAAGAATCCTTGCgatgtcgagaaaattttacTCGTAGCCCTGACGATGTCGAAGTAGAATTCGAATGTAAGGACGAGAAGCTCGGCATTAACTTATTAGTAGTCAAGAAGATAAAGGACGATTATCCAGATCATTTGCAGCATATGGAAAATAGTTACGATAATCAAAcccaaaagaaaattaaaaaagaaattgagaacgaaataaaagaagaattgaATGCGGATGGTGAACTCAGTGATGCATTTGatgcgaatgaaaaaacatttgctcaaaaaAGTCTATGCGAAAAGACCAACGATGAGGTGCATAATGTTACCAAACATACATGCGAGatttgcaaaaagaaattatcaaCCAAGGGTAACCTTAAAATCCACATTGATTCGGTTCATAATGGTGTCAAGCATACGTGCGATACATGTCGAAAAACATTCACCCAAAAAGGAGATCTCAAGATTCACATCGGTGCAATTCATAATGGTATTAAACATGAGTGTGGTATATGtagaaagacattcacacaaaaaggaaagctcaaaattcacatcgatgcgatacataatggtatggcacctacATGCGAAttatgtggaaagacattcacacaaaaaggagATCTCAAGAGGCATATCAATggacataatggtgttaaacatgcgtgtggtgtgtgtggaaagacattcacacaaaaaggacctctcaaaatgcacatcgatgcgatgcataatggtaaggcacctacttgcgaagtgtgcggaaagaaattcgcaTTCAAGAGTGGTCTCAAACTTCACATGGATGcaatgcataatggtatggcacctacttgcgaaatgtgcggaaagaaattcctAACCGAGCGTTCACTCAAGCTTCACATCGATGGACATAATGGTGTGAAACATGCGTGTGGTGtgtgtggaaagacattcacacaaaaatttgttctcaaaaatcacatcgatgcgatgcataatggtaagGCACCTATTTGCGAagtgtgcggaaagaaattcgcaTTTAAGAATAGTCTCAAAACCCACATGAATTCAATACACCACTCGGGTATAGTGAAGGAGGAACCAAACGACGATTCCCCGattgaaaatgatgattaTCAGTTAATTGACAATGCACACGACGCTAACACTGACGAATTCTCGCGTTcttgtcgagaaaatttaactCATGGCCCTAAAGATATTAAAATAGAATTCGAATGTAAGGACGAAAAGTCCAGCATTAACTTATTAGTAGTCAAAAAGATAGAGGACGATTATCCAGATCATTTGCAGCATATGGAAAATAGTTACGATTATCaaactcaaaagaaaattaaagaagaaattgtcgACGAAGTAAAAGGAGAGTTGAATTTGGATCGTGAATTCAGTGATGCATttgatgcaaatgaaaaaacatttgctcaaaaaAGTCTATGCGAAAAGCCCAACGATGAGGTACATAATGGTATCAAACATACATGCAAGATTTGTAGAAAGAAACTCTCAACTAAGCAAGGTcttaaaatccacatcgattcagtacataatggtgttaaacatgcgtgtggcacatgtggaaagacattcacacgaaaagaaaagctcaaaattcacatcgatgcgattcATAAAGAAatggcacctacttgcgaagtgtgcggaaagaaatttctaACGAAGAGTGCACTCAAGATGCACATTGACGGACATAATGGTATTAGACATGCATGTGGTGTATGTGGAAAggcatttacaaaaaaaagtaatctgaAAAGACACATCGATatgatgcataatggtatggcacctGCATGCGAAttatgcggaaaaaaatttcaagcgaAGACAGCACTCAAgacccacatcgattcagttcataatggtgttaaacatgcatGTGGTAtgtgtgaaaagacattctcacAAAAAGGTCATCTCAAGACTCACATCGATAcaatgcataatgTTATCATCACGGTACGACCATAA
Protein Sequence: MRNMDFSGVYNCNVRVKEEPNDNPPIENDDYQIIDNANDANTEESLRCRENFTRSPDDVEVEFECKDEKLGINLLVVKKIKDDYPDHLQHMENSYDNQTQKKIKKEIENEIKEELNADGELSDAFDANEKTFAQKSLCEKTNDEVHNVTKHTCEICKKKLSTKGNLKIHIDSVHNGVKHTCDTCRKTFTQKGDLKIHIGAIHNGIKHECGICRKTFTQKGKLKIHIDAIHNGMAPTCELCGKTFTQKGDLKRHINGHNGVKHACGVCGKTFTQKGPLKMHIDAMHNGKAPTCEVCGKKFAFKSGLKLHMDAMHNGMAPTCEMCGKKFLTERSLKLHIDGHNGVKHACGVCGKTFTQKFVLKNHIDAMHNGKAPICEVCGKKFAFKNSLKTHMNSIHHSGIVKEEPNDDSPIENDDYQLIDNAHDANTDEFSRSCRENLTHGPKDIKIEFECKDEKSSINLLVVKKIEDDYPDHLQHMENSYDYQTQKKIKEEIVDEVKGELNLDREFSDAFDANEKTFAQKSLCEKPNDEVHNGIKHTCKICRKKLSTKQGLKIHIDSVHNGVKHACGTCGKTFTRKEKLKIHIDAIHKEMAPTCEVCGKKFLTKSALKMHIDGHNGIRHACGVCGKAFTKKSNLKRHIDMMHNGMAPACELCGKKFQAKTALKTHIDSVHNGVKHACGMCEKTFSQKGHLKTHIDTMHNVIITVRP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485120;
90% Identity: iTF_01485120;
80% Identity: iTF_01485120;