Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:889863-891599[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.00032 0.024 14.2 1.2 18 44 158 181 139 181 0.93

2 8 0.0015 0.11 12.0 5.4 18 43 186 208 184 209 0.95

3 8 0.24 18 5.0 1.9 16 29 212 225 209 241 0.77

4 8 0.0091 0.68 9.5 2.8 18 43 242 264 238 265 0.94

5 8 0.42 32 4.2 0.3 18 37 270 286 268 293 0.74

6 8 0.016 1.2 8.8 0.7 19 43 299 320 296 321 0.95

7 8 3.6 2.7e+02 1.2 2.7 18 41 326 346 324 349 0.74

8 8 0.21 16 5.1 4.6 16 44 351 376 340 376 0.82

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.00032	0.024	14.2	1.2	18	44	158	181	139	181	0.93
2	8	0.0015	0.11	12.0	5.4	18	43	186	208	184	209	0.95
3	8	0.24	18	5.0	1.9	16	29	212	225	209	241	0.77
4	8	0.0091	0.68	9.5	2.8	18	43	242	264	238	265	0.94
5	8	0.42	32	4.2	0.3	18	37	270	286	268	293	0.74
6	8	0.016	1.2	8.8	0.7	19	43	299	320	296	321	0.95
7	8	3.6	2.7e+02	1.2	2.7	18	41	326	346	324	349	0.74
8	8	0.21	16	5.1	4.6	16	44	351	376	340	376	0.82

Sequence Information

Coding Sequence: ATGGATTCAAGGGAATTAATTAATAGCGgagtcagaGTAAAGAAGGAACCCCGTGATGACTCGTTTACGGAAACTGATGATCACGAAGTAATTGACAAGACGTCTGATGTTAAAGATGTTCGATTCTTTAGAGCATATTCAGCGCTTCAAGaatgtacaaaaaagtatgaaacTGACGAAATGGAAGTGGAATTTGAGTGTAAAGACGTAAAGCTCAGCATGAATTTAtctgaagttaaaaaaatcgacgattGTTCTCAAAATCCTTTTCAGCACATCAAAGATAGTGACTATGATAAGACTCAAAACATAatcaaaatagaaaatgaggttaaagtaaaaaaagaattagatttgaattctGATTGTAAAGTTAgcgaaaaaattaagaagaaaagagaaagaaaaaagttcaacTATATGAATAGACTCCAAATCCACATTGGTAAGGTGCATAATGGAATCAAGCctgcatgtgatatatgcgggaaaaaattctcaaacaagagtaatctcaaaattcacattgacacagtgcataatggtgttacTCATACATGCAATACATGTAAAAAGAAGTTTAAACGAAAGCAAAATCTGAATAGCCATATTAAATCAAAACATGATGGTACTACACATAAATGTGACACTTGTGGAAAATCATATTCACGAaaaatttatctcaaaattcacattgatgcagtgcacaatggtgtcacacacacatgcgatacatgtgaaaaaaagtttgcacgAAAGCATGATCTGAATAGGCATATTAAATCAAAACATGATGGTGTTACATATACATGTGACACTTGTGGAAAATcatattcacaaaaaattgatctcaaaactcacattgacgtagtgcacaatggtgtcacacATCCATGCGATacatgtgaaaaaaagtttgcacgAAAGCAAGATCTGAATAGGCATATTAAATCAAAACACGATGGTGTTACACATACATGTGACACTTGTGGAAAAACATATAAACATCTATTTACTCTCAGGAAGCATGTTAAATTATCTCATAATGTTATCCATgaatgtgataaatgcggTAAGTCATttgcaaaaaagaataatcTAAAAATGCACATAAATGTGGTACATAATTCATACACGAGTAccaaataa
Protein Sequence: MDSRELINSGVRVKKEPRDDSFTETDDHEVIDKTSDVKDVRFFRAYSALQECTKKYETDEMEVEFECKDVKLSMNLSEVKKIDDCSQNPFQHIKDSDYDKTQNIIKIENEVKVKKELDLNSDCKVSEKIKKKRERKKFNYMNRLQIHIGKVHNGIKPACDICGKKFSNKSNLKIHIDTVHNGVTHTCNTCKKKFKRKQNLNSHIKSKHDGTTHKCDTCGKSYSRKIYLKIHIDAVHNGVTHTCDTCEKKFARKHDLNRHIKSKHDGVTYTCDTCGKSYSQKIDLKTHIDVVHNGVTHPCDTCEKKFARKQDLNRHIKSKHDGVTHTCDTCGKTYKHLFTLRKHVKLSHNVIHECDKCGKSFAKKNNLKMHINVVHNSYTSTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485418;
90% Identity: iTF_01485418;
80% Identity: iTF_01485418;