Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:617-3354[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.74 55 3.4 0.3 19 44 169 191 166 191 0.92

2 13 0.22 16 5.1 0.8 19 43 197 218 193 223 0.81

3 13 0.2 15 5.2 0.1 19 44 225 247 219 247 0.90

4 13 8.3 6.2e+02 0.0 1.2 18 43 252 274 249 275 0.76

5 13 0.004 0.3 10.6 1.0 19 44 281 303 272 303 0.94

6 13 0.015 1.1 8.8 1.3 19 44 309 331 306 331 0.93

7 13 0.011 0.85 9.2 0.3 19 44 337 359 334 359 0.87

8 13 0.052 3.8 7.1 1.0 19 43 365 386 362 387 0.80

9 13 0.00016 0.012 15.1 0.4 19 44 421 443 415 443 0.94

10 13 0.021 1.6 8.3 1.2 19 39 449 466 446 471 0.74

11 13 0.013 0.93 9.1 1.9 19 44 477 499 466 499 0.89

12 13 0.57 42 3.7 2.3 19 43 505 526 503 527 0.84

13 13 5.2 3.9e+02 0.7 0.2 18 34 532 545 529 549 0.75

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.74	55	3.4	0.3	19	44	169	191	166	191	0.92
2	13	0.22	16	5.1	0.8	19	43	197	218	193	223	0.81
3	13	0.2	15	5.2	0.1	19	44	225	247	219	247	0.90
4	13	8.3	6.2e+02	0.0	1.2	18	43	252	274	249	275	0.76
5	13	0.004	0.3	10.6	1.0	19	44	281	303	272	303	0.94
6	13	0.015	1.1	8.8	1.3	19	44	309	331	306	331	0.93
7	13	0.011	0.85	9.2	0.3	19	44	337	359	334	359	0.87
8	13	0.052	3.8	7.1	1.0	19	43	365	386	362	387	0.80
9	13	0.00016	0.012	15.1	0.4	19	44	421	443	415	443	0.94
10	13	0.021	1.6	8.3	1.2	19	39	449	466	446	471	0.74
11	13	0.013	0.93	9.1	1.9	19	44	477	499	466	499	0.89
12	13	0.57	42	3.7	2.3	19	43	505	526	503	527	0.84
13	13	5.2	3.9e+02	0.7	0.2	18	34	532	545	529	549	0.75

Sequence Information

Coding Sequence: ATGGAATCGGGCAATCTATCAAATCCTACCgtgaaagtgaaagatGAGCCTCTTGATGAACCTTtcaatgatgataatgattacaaaataattgaccCAACACCAgttactaaaaatattaaatacaagATGTTTCGgcaagaaaattcaacaCAAGAGCTTTTTCAAGAATACGacgaaaatcataaaaatgaacttGACGACCCGAAAATAGAAATGGAATGTAGAGACATGAAGCTCAATTTATTAGCAGTTGcgaaaattgaagttttttctCCCAATCAATGTCAGGATAGCGATGTTTATAACAACggaagcaaaataaaattagaaactgTCGCGGGGCCGAAGAAAGGAATTTTTAGCGAAAAAGAAACTGATTTGAATTTCGGACGTGGACtcagcgagaaaaatgaaacaggAAGTGTTTCAAAAGAGGTGAACTACGAACATAGGTTAAAAACTCACACTGAATCAGCCCGTAATGTCAATATCACACCTGCATGTGATGTATGTAGAAAATCATTCGGATATAAGAGTCATCTCCAaagacacatcgattcggtacaTCGTAAAATAAGGCATGCGtgcgatatatgccaaaagacattctcagagAAGAAAAGTCTCAGAAATCACaccgattcggtgcataatgaagtcagacatgcatgcgataaatgcccAAAGAAATTCTCAGACAAGGGTAATCTCGGAAGGCACATCGCTTCGGTGCATCGTAAAATAAGGTATCGATGTGATGAATGTGGGAAATCATTCAGATATAAGGGTCATCTTCAAAGACACATCGATTCGTTACATCGTAAAATCACGCAtccatgcgatatatgccaaaagacattctcacaGAAGAGTAGTCTCAAATATCACATAGaatcggtgcataatggtatttCACATGCGTGCGATAAATGCCCAAAGACATTCTCAACCAAGAGTAATCTCAGAAATCATATCggttcggtgcataatggtgtcacatatgcgtgtgatatttgcggaaagaagttCACAAATAAAGGTAGTCTCAGAaatcacatcgattcggtgcataatggtgtcagacatgcatgcgatatatgcggaaaTGTTTATAAACGAAGTGGCgatctcaaaactcacgtcCATTCGGTCcatcataaaattacgtaTCGATGTGATGAATGTGGAAAATCATTCAGATGTAAGACTCATCTTCAAAGACACATCGATTCGTTACATCGTAAAATCACGCAttcatgcgatatatgccaaaagacattctcagacaAGAGTAATCTTAGAAAGCACATCGaatcggtgcataatggtgttagacatgcatgtgacatttgtggaaagacattcactcGAAAAGACCACCTCACAACTCACATCGAATCGATACATCATAAAATTACTCATCCATGTAATAAATGCCAAAAGACGTTCTCAGACAAGAATAGTCTCAAAAGGCATATGGATGCGGAGCACAATGGAATCACCCATCcatgtgatttttgtgaaaaaaaatttaaatatcaaacTCATCTCAATAAACATGTCAAAAACTCGCATAGTGGTATCGTACTTTCATGCGAGACATGCGGCAAGACGTTCGGACAGAAAAGAAATCTCAAAGACCACCAAATAGCACATGACTCACGCATTAGCGcgaaataa
Protein Sequence: MESGNLSNPTVKVKDEPLDEPFNDDNDYKIIDPTPVTKNIKYKMFRQENSTQELFQEYDENHKNELDDPKIEMECRDMKLNLLAVAKIEVFSPNQCQDSDVYNNGSKIKLETVAGPKKGIFSEKETDLNFGRGLSEKNETGSVSKEVNYEHRLKTHTESARNVNITPACDVCRKSFGYKSHLQRHIDSVHRKIRHACDICQKTFSEKKSLRNHTDSVHNEVRHACDKCPKKFSDKGNLGRHIASVHRKIRYRCDECGKSFRYKGHLQRHIDSLHRKITHPCDICQKTFSQKSSLKYHIESVHNGISHACDKCPKTFSTKSNLRNHIGSVHNGVTYACDICGKKFTNKGSLRNHIDSVHNGVRHACDICGNVYKRSGDLKTHVHSVHHKITYRCDECGKSFRCKTHLQRHIDSLHRKITHSCDICQKTFSDKSNLRKHIESVHNGVRHACDICGKTFTRKDHLTTHIESIHHKITHPCNKCQKTFSDKNSLKRHMDAEHNGITHPCDFCEKKFKYQTHLNKHVKNSHSGIVLSCETCGKTFGQKRNLKDHQIAHDSRISAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485090;
90% Identity: iTF_01485090;
80% Identity: iTF_01485090;