Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:401569-403451[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.043 3.2 7.3 1.9 18 43 156 178 145 179 0.82

2 8 3.4 2.5e+02 1.3 3.1 16 44 182 207 170 207 0.80

3 8 0.0099 0.74 9.4 1.0 17 44 211 235 207 235 0.89

4 8 0.14 11 5.7 0.4 19 44 241 263 238 263 0.89

5 8 0.75 56 3.4 0.5 18 33 268 280 266 291 0.74

6 8 0.0035 0.26 10.8 1.8 16 44 294 319 285 319 0.90

7 8 0.24 18 5.0 1.7 18 43 325 347 322 348 0.85

8 8 1.9e-05 0.0014 18.1 2.8 16 43 351 375 349 376 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.043	3.2	7.3	1.9	18	43	156	178	145	179	0.82
2	8	3.4	2.5e+02	1.3	3.1	16	44	182	207	170	207	0.80
3	8	0.0099	0.74	9.4	1.0	17	44	211	235	207	235	0.89
4	8	0.14	11	5.7	0.4	19	44	241	263	238	263	0.89
5	8	0.75	56	3.4	0.5	18	33	268	280	266	291	0.74
6	8	0.0035	0.26	10.8	1.8	16	44	294	319	285	319	0.90
7	8	0.24	18	5.0	1.7	18	43	325	347	322	348	0.85
8	8	1.9e-05	0.0014	18.1	2.8	16	43	351	375	349	376	0.94

Sequence Information

Coding Sequence: ATGGAATTTAACGGTTTATTCAACGGTGCCATCAGaataaaGGAAGAACCTATTGAGGTGTCGCTCacagaaaataatgattatgaAACGATTGACAAGGAACCCAATAGCAAAAATGTTCAGTCCTCCAGATTTCGAGATAATTCTACCTGTAAGCTTCAAGAACGGGACAGATATTATGAATCTGAATTGAATGATCTGGAAATTGAATTCGAGTGTAGAGACGAAAAGCCTCACATAAACTTATTAGTAGTAAAGGACGATTATtctcaaaattatttgcaaaacatgaaaaatagtgATAATCATATGACTCAAAACATCATTAAAACAGAAGCCGtggttgtaaaaaaagaattttccaACAACgattatcaaaaattgaaaaaatttgttgacgACGGATTCAGCAAACCAAACAgcacgaaaaagaaaattgatttgGCCCACAACAGTGTTACACATTCGTGTAATGTATGTGGAAAAACGTTTAGATATAAGGGAAGTATGAAAAAGCACATAGATACAATTCATAAAGGTATTAACTACGCTTGTGATGTATGTGgatcaaaattcaaaagtaaaagttatcttaaaatccacatcaatgcgatgcataatggtaatATCTACGCATGCGATACGTGCGGCAAGAATTATGTAACGAAGGGTAATCTCCAACATCACATTGATTCAATGCACAATGGCATCACATTTGCATGTGAAATATGTGGAACGACTTTCTCAACTAAAGGAAATCTCCAAATTCATATCAAAATGAAGCATAAAGGCATCACCCacacatgtgacaaatgcgggaaaaaatttgcaaaaaaacagGATCTAAAAATCCACATTGAtgcggtgcataatggtatcaaaCTTACATGTGAATTATGTGTAAAAACGTTCTCAAATAAAGGGAATCTCCAATTTCACATCAAGTCGAAGCATAAAGGTATCACCCCCCAcgtatgtgacaaatgcgggaaaaaatttacacaaaagtgTCGCCTCAAAAGTCACATTGATGTcgtgcataatggtatcaaaCTGAAATGTGAAGTATGTGGAAAGCAATTCACACGAAAACATAATTTAAGAGCCCACATGCGTAATATGCATGTAATATGCAGTCGGTAA
Protein Sequence: MEFNGLFNGAIRIKEEPIEVSLTENNDYETIDKEPNSKNVQSSRFRDNSTCKLQERDRYYESELNDLEIEFECRDEKPHINLLVVKDDYSQNYLQNMKNSDNHMTQNIIKTEAVVVKKEFSNNDYQKLKKFVDDGFSKPNSTKKKIDLAHNSVTHSCNVCGKTFRYKGSMKKHIDTIHKGINYACDVCGSKFKSKSYLKIHINAMHNGNIYACDTCGKNYVTKGNLQHHIDSMHNGITFACEICGTTFSTKGNLQIHIKMKHKGITHTCDKCGKKFAKKQDLKIHIDAVHNGIKLTCELCVKTFSNKGNLQFHIKSKHKGITPHVCDKCGKKFTQKCRLKSHIDVVHNGIKLKCEVCGKQFTRKHNLRAHMRNMHVICSR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485299;
90% Identity: iTF_01485366;
80% Identity: iTF_01485366;