Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:4199-7376[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.35 26 4.4 2.4 15 44 184 210 177 210 0.81

2 12 0.55 41 3.8 1.1 18 30 215 229 213 242 0.77

3 12 0.014 1.1 8.9 3.4 19 44 244 266 232 266 0.90

4 12 0.04 3 7.4 4.6 18 44 271 294 267 294 0.93

5 12 0.072 5.4 6.6 1.1 18 30 299 313 296 322 0.74

6 12 0.0033 0.25 10.9 1.5 18 43 327 349 316 355 0.88

7 12 0.014 1 8.9 0.6 19 44 356 378 354 378 0.95

8 12 0.031 2.3 7.8 0.8 18 43 383 405 381 411 0.87

9 12 0.00013 0.0098 15.4 2.5 19 44 412 434 401 434 0.88

10 12 0.03 2.2 7.8 0.8 18 44 439 462 437 462 0.94

11 12 0.45 33 4.1 3.2 18 44 467 490 465 490 0.88

12 12 0.27 20 4.8 0.0 33 44 507 518 495 518 0.80

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.35	26	4.4	2.4	15	44	184	210	177	210	0.81
2	12	0.55	41	3.8	1.1	18	30	215	229	213	242	0.77
3	12	0.014	1.1	8.9	3.4	19	44	244	266	232	266	0.90
4	12	0.04	3	7.4	4.6	18	44	271	294	267	294	0.93
5	12	0.072	5.4	6.6	1.1	18	30	299	313	296	322	0.74
6	12	0.0033	0.25	10.9	1.5	18	43	327	349	316	355	0.88
7	12	0.014	1	8.9	0.6	19	44	356	378	354	378	0.95
8	12	0.031	2.3	7.8	0.8	18	43	383	405	381	411	0.87
9	12	0.00013	0.0098	15.4	2.5	19	44	412	434	401	434	0.88
10	12	0.03	2.2	7.8	0.8	18	44	439	462	437	462	0.94
11	12	0.45	33	4.1	3.2	18	44	467	490	465	490	0.88
12	12	0.27	20	4.8	0.0	33	44	507	518	495	518	0.80

Sequence Information

Coding Sequence: ATGGAACCCAGTGGTTTGTTCAATTTCGCTGTgagAGTGAAGGAGGAACCTGAAGAGATGTCGCTAATTGAAGATAATTGTAACGTAATTGACAAGACACTCGATACAAACAATTTTCCGTTCTTGAAATTTCAAGGAAGTCCGactTATAGGCTTCGAGAACACAACAAATATCATGATAATGAACTCAACGAGTTGGCGATCGAGTTTGAATGTAGAGACATGAAGCCGAGCGTGGATTTATTAGTAGTTAAGAAAATTGAGGATCCTTCTTCAAATGACTTGCAAGATATGAATTACAGCAACTATGATCAAgctcaaaacaaaattaaaacagaaattgtaaatgatgtaaaaaaagaattgaattcGAACTACGAAGCCTGCCATGTATTAGAGACaagtggaaaaatatttacccaGAAAGGTTATCTCGAAACCTATAGTGGCAGGGTGCCCAGTGATGTCAGAGAAACGCGCAATAcacgcagaaaaaaattcacaaaaaaagaCTGTCTACCTGTCCGCATCAAAACGGTACATAATGGTAACAAACATGCATGTGACACATGCGGAAAAACATATAAACAAAAGGGTGATCTCAATAAGCACGTACGGTCATCGCACCAAGGTATCACCTACACCTGTGAGgcatgcggaaaaaaattttcacaaaaaaaatctctcggaATTCATATGgatgcagtacataataaaatcaccCATCCTTGCAGTATgtgtggaaagaaattctgTGATAAGAGTAATCTCAGAAGGCACATTGATTCGGTGCACCAAAGTATCATCCAcacatgtgatatatgcggaaagacataCAATCTTAAGTGTAATTTCACTAGGCACGTAAATTCATCTCACAAAGGTATCAACCACACATGTGATATCTGCGGAAAGACATATAAACAAAAGGGTGATCTCAATATACACGTACGATCATCGCATCAAGGTATCACCTACACCTGCGATgcatgcggaaagaaattttcacaaaaaaaaaatctccgaACCCATATGGAtgtagtacataataaaatcaccCATCCTTGCAGTatatgtggaaagaaattctcatTTAAGAGTTATCTCAGAAAGCACGTACAATCATCGCACCAAGGTATCACCTACAACTGCGATgcatgcggaaagaaattttcacaaaaaagtaatctccACAGCCATATCGATGCGATACACAATAAAATCACCCATCCTTGTAGTATctgtggaaagaaattctcaaataACAGTAATCTCAAAAAGCACGTACGATCATCGCATCAAGGTATCACTCacacatgtgatatttgcggcaCGACGTTTACTCAAAAATCTGATCTTAAAAGGCACGTAAAATCATTGCACCAAGGTATCACCTGCAAATGTGATACATGCGGAAAGTCATACACTCAAAAGGGTAATCTTAATAGGCACGTACGATTATCTCACCAAGGCATTACCCATGCATGTGATATACGTggggaaattttttcacaaaaggaTAATCTCAGTAGGCATATACAATCATCACACCAAGATATCAGCCACACGTCAAATGTGCGGGAAGACATTCGCAAGAAAGAATCATCTCCAAATCCAAATAACTAA
Protein Sequence: MEPSGLFNFAVRVKEEPEEMSLIEDNCNVIDKTLDTNNFPFLKFQGSPTYRLREHNKYHDNELNELAIEFECRDMKPSVDLLVVKKIEDPSSNDLQDMNYSNYDQAQNKIKTEIVNDVKKELNSNYEACHVLETSGKIFTQKGYLETYSGRVPSDVRETRNTRRKKFTKKDCLPVRIKTVHNGNKHACDTCGKTYKQKGDLNKHVRSSHQGITYTCEACGKKFSQKKSLGIHMDAVHNKITHPCSMCGKKFCDKSNLRRHIDSVHQSIIHTCDICGKTYNLKCNFTRHVNSSHKGINHTCDICGKTYKQKGDLNIHVRSSHQGITYTCDACGKKFSQKKNLRTHMDVVHNKITHPCSICGKKFSFKSYLRKHVQSSHQGITYNCDACGKKFSQKSNLHSHIDAIHNKITHPCSICGKKFSNNSNLKKHVRSSHQGITHTCDICGTTFTQKSDLKRHVKSLHQGITCKCDTCGKSYTQKGNLNRHVRLSHQGITHACDIRGEIFSQKDNLSRHIQSSHQDISHTSNVREDIRKKESSPNPNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485134;
90% Identity: iTF_01485134;
80% Identity: iTF_01485134;