Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:1295343-1298078[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00035 0.026 14.0 3.9 5 43 152 186 139 187 0.88

2 14 0.064 4.8 6.8 0.6 19 44 193 215 189 215 0.93

3 14 0.0012 0.092 12.3 2.1 19 44 221 243 218 243 0.94

4 14 0.047 3.5 7.2 0.3 19 43 249 270 246 271 0.81

5 14 1.6 1.2e+02 2.3 5.6 14 43 272 298 260 299 0.72

6 14 0.0095 0.71 9.4 3.5 18 43 304 326 290 327 0.77

7 14 0.31 23 4.6 6.7 13 44 327 355 316 355 0.83

8 14 6.9e-05 0.0052 16.3 0.8 18 44 360 383 357 383 0.95

9 14 0.03 2.2 7.8 1.0 19 44 389 411 387 411 0.95

10 14 0.0043 0.32 10.6 0.5 19 44 417 439 414 439 0.88

11 14 0.43 32 4.1 3.6 18 30 444 458 442 470 0.73

12 14 7.9e-05 0.0059 16.1 3.0 14 44 468 495 460 495 0.89

13 14 0.071 5.3 6.6 0.8 19 44 501 523 499 523 0.89

14 14 0.11 8.6 6.0 1.1 14 31 524 541 520 551 0.83

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00035	0.026	14.0	3.9	5	43	152	186	139	187	0.88
2	14	0.064	4.8	6.8	0.6	19	44	193	215	189	215	0.93
3	14	0.0012	0.092	12.3	2.1	19	44	221	243	218	243	0.94
4	14	0.047	3.5	7.2	0.3	19	43	249	270	246	271	0.81
5	14	1.6	1.2e+02	2.3	5.6	14	43	272	298	260	299	0.72
6	14	0.0095	0.71	9.4	3.5	18	43	304	326	290	327	0.77
7	14	0.31	23	4.6	6.7	13	44	327	355	316	355	0.83
8	14	6.9e-05	0.0052	16.3	0.8	18	44	360	383	357	383	0.95
9	14	0.03	2.2	7.8	1.0	19	44	389	411	387	411	0.95
10	14	0.0043	0.32	10.6	0.5	19	44	417	439	414	439	0.88
11	14	0.43	32	4.1	3.6	18	30	444	458	442	470	0.73
12	14	7.9e-05	0.0059	16.1	3.0	14	44	468	495	460	495	0.89
13	14	0.071	5.3	6.6	0.8	19	44	501	523	499	523	0.89
14	14	0.11	8.6	6.0	1.1	14	31	524	541	520	551	0.83

Sequence Information

Coding Sequence: ATGGAATCCGGTGATATACTTGATTGCGCCatcagagtgaaaaacGAGCCTAGAGATGGGTTGCtcagtgaaaataattgtgatATGATTGACGAGAAACCGGATCTTAAAAGTGTTCAACTCTTACAATTTCTGCGAGAAAACTCAGCTCATATCCATCGTAGTTGCGACATTACGTTTGAAAAAGAACTTGATGAGGAATTGAAAATTacctttgaatgtgaagacGTCAAGCCCAACGTTGGTTCATTAGCATCTAAGAAAATTGACCACTTGAAGGGTTTGAAATATAGCGATGATTTTAAAACTGAAcgtataattaaaatagaacCCTTGGATGAAGTGAAACAGGAATTTTTCGGCGATAAAGCTACGATATTGAGTTTCAATCGTGGACTCAacggaaaaaatgaaaaaattacgaaaaagtttaacaacaaaaatagACTCAAAACACACGTTGGCTCGATTAATAAAGGTAAAAGTCATTCGTGTcaaatatgcggaaagaaatttgcaaATAAGTCTAATCTGAATAGGCATGTCAAATCATCGCATGATCAcatcacacatgcatgtgatgtatgtaaaaagacattttcactaaaaagtaatctcaaaatccacgtAGATTCAGTACACAATCGTGTCACGcatgcatgcgatatttgcggcaagacattttcacaaaaaagtaatctcaaaatgCACATAAATTCAATACACAATCgtgtcacacatgcatgcgatgtatgcggcaagacattttcacgaAAAGATCATCTCAAGACCCACATCGATGCAGTGCATAATAGTCTCACTTATAAATGCGATACATGCGGCAAGTCGTATACTTATAAACATCATCTCAAGACCCACGTAGATGCAGTACACAATCgtgtcacacatgcatgccgtatatgcggcaagacattttcacgaaatagtcatctcaaaatccacgtagattcagtacataatagTCTCTCTTATAAATGCGATACATGCGGCAAGTCGTATACTTATAAACATCATCTCAAgacccacatcgattcagtacataatggtctCACTTATAAATGCGATGTATGCGGtaagacattttcacaaaaagatAATCTTAAGAAACACATCAGGACcatgcataataaaatcactcacccatgtgatatatgcaaaaagaaattcccaGATAAAAGTAATCTTTACAAACATATAAATTCAACGCACAATGGTATCAGATATGCATGTAGTATATGCGGGAAGAAATACTCCCAGAAAGGTGATCTCAAAAACCACATCGATTCGGCCCATAATGGCATCACACATACTTGcaatatttgcagaaaaaatttttcatgtaagaGTGCTCTTAACTTCCACATAAATGGTATTCATAATGATACAACatttgcatgtgatatttgtggaaaggAGTTCTCAAACAAAACTAATCTTCACAAACATATCAATTCGATGCACAATGGTATCACGCGTGCATGCGGtatttgtggaaaaaagtCCTTGGGTAAGAGTAGTCTCAAAAGACACATCGATACGATTCACAATAGTTTCAAActtgcatgtgataaatgcggcaagacattttccCAAAAAAGTAATATGAAGATCGACATCGATGaggtgcataataaaattaatcgcaCATGCAATGCCTGCGGAAAATATACGTAA
Protein Sequence: MESGDILDCAIRVKNEPRDGLLSENNCDMIDEKPDLKSVQLLQFLRENSAHIHRSCDITFEKELDEELKITFECEDVKPNVGSLASKKIDHLKGLKYSDDFKTERIIKIEPLDEVKQEFFGDKATILSFNRGLNGKNEKITKKFNNKNRLKTHVGSINKGKSHSCQICGKKFANKSNLNRHVKSSHDHITHACDVCKKTFSLKSNLKIHVDSVHNRVTHACDICGKTFSQKSNLKMHINSIHNRVTHACDVCGKTFSRKDHLKTHIDAVHNSLTYKCDTCGKSYTYKHHLKTHVDAVHNRVTHACRICGKTFSRNSHLKIHVDSVHNSLSYKCDTCGKSYTYKHHLKTHIDSVHNGLTYKCDVCGKTFSQKDNLKKHIRTMHNKITHPCDICKKKFPDKSNLYKHINSTHNGIRYACSICGKKYSQKGDLKNHIDSAHNGITHTCNICRKNFSCKSALNFHINGIHNDTTFACDICGKEFSNKTNLHKHINSMHNGITRACGICGKKSLGKSSLKRHIDTIHNSFKLACDKCGKTFSQKSNMKIDIDEVHNKINRTCNACGKYT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485097;
90% Identity: iTF_01485097;
80% Identity: iTF_01485097;