Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:884461-886525[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 6.8 5e+02 0.3 0.1 28 43 151 167 146 168 0.73

2 14 0.17 12 5.5 3.5 10 38 166 190 161 200 0.73

3 14 0.25 19 4.9 3.2 19 44 202 224 195 224 0.91

4 14 0.0003 0.022 14.2 0.3 19 44 230 252 227 252 0.93

5 14 0.011 0.84 9.2 0.1 19 44 258 280 255 280 0.93

6 14 0.00028 0.021 14.3 2.8 15 43 282 307 280 308 0.93

7 14 0.00012 0.0088 15.5 1.1 13 44 308 336 307 336 0.93

8 14 0.00029 0.021 14.3 2.9 15 43 338 363 336 364 0.93

9 14 0.0001 0.0076 15.7 0.4 14 44 365 392 364 392 0.93

10 14 0.069 5.1 6.7 3.5 19 44 398 420 396 420 0.94

11 14 0.00026 0.019 14.5 0.5 18 44 425 448 421 448 0.91

12 14 0.05 3.7 7.1 3.9 19 44 454 476 452 476 0.94

13 14 0.0014 0.1 12.1 0.6 18 43 481 503 477 504 0.92

14 14 0.22 16 5.1 3.0 18 43 509 531 507 532 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	6.8	5e+02	0.3	0.1	28	43	151	167	146	168	0.73
2	14	0.17	12	5.5	3.5	10	38	166	190	161	200	0.73
3	14	0.25	19	4.9	3.2	19	44	202	224	195	224	0.91
4	14	0.0003	0.022	14.2	0.3	19	44	230	252	227	252	0.93
5	14	0.011	0.84	9.2	0.1	19	44	258	280	255	280	0.93
6	14	0.00028	0.021	14.3	2.8	15	43	282	307	280	308	0.93
7	14	0.00012	0.0088	15.5	1.1	13	44	308	336	307	336	0.93
8	14	0.00029	0.021	14.3	2.9	15	43	338	363	336	364	0.93
9	14	0.0001	0.0076	15.7	0.4	14	44	365	392	364	392	0.93
10	14	0.069	5.1	6.7	3.5	19	44	398	420	396	420	0.94
11	14	0.00026	0.019	14.5	0.5	18	44	425	448	421	448	0.91
12	14	0.05	3.7	7.1	3.9	19	44	454	476	452	476	0.94
13	14	0.0014	0.1	12.1	0.6	18	43	481	503	477	504	0.92
14	14	0.22	16	5.1	3.0	18	43	509	531	507	532	0.92

Sequence Information

Coding Sequence: ATGGAATCCGgtagtttatttaattttactgaCAGAATCAAAGAGGAACCTGCTGATATGTCGCTTATCGGAAATGGTTGTGAAATGATTGATGAGAAACCCGATTTGAAAAACTTCCAGCTCTCACCATTTCCACGAGAAAATACAAATCATAACCTACGTAAATGTGACGAAAATCAAGAAACTGAACTCGGTAAAGCAATggaaatagtttttgaatgtGAAGATTTCAAACCCAAAATAGATTTACCGTTAGTTAAACAAATTGTCAACTACTCTCCGAATCACttgcaaaatttgaaagataGCGATGTATGTAAAAGtcaaaagataattaaaatgGAACACACACAGGAAGTGAAACAGGAAATTATTTGTGAAGTTACAGAGGAAtcgaattcaaatttcaactgtaaatttattgaacaaaatgaaaaaagaagaattactaaaaagtttaacaacaaaaatatgctCCGAACACATATCGATAGAGtgcacgataaaaaaaacccCGCATGTAAAgtatgtggaaaaaaattttcaagtaaaaattatttaaaagtcCACATTGATGGAGTGCATAAAAATGTCACCCACTCATGTGATAATTGtggcaaaaaatttacacaaagaAGTAGTCTCAATTCCCACATAAATTCGAAACATAATGGTGTTTCCCAGGCTTGTGATATATGcggcaaaaaattttcgtataaATCTAGTCTGAAAACCCATAtggattcggtgcataatggtattaACTACGCGTGTGActtatgcggaaagaaatttccaTTGAAGACTAATCTCAAGACCCACattgattcggtgcataatggtaccAAACATAAATGTGATCAATGCGGCAAgaaattttcgcaaaaatcTAATCTGAAAACCCACATAAATTCAGTGcatgatgataataaatacGCCTGTGACTTatgcgaaaagacattttcattaaaGACTAATCTCAAGAACCACattgattcggtgcataatggtaccAAACATAAATGTGATCAATGCGGCAAgaaattttcgcaaaaatcTAATCTGAAAACCCACATAAATTCAGTGcatgatgataataaatatGCCTGTGACTTatgcgaaaagacattttcattaaaGACTAATCTCAAGAACCACATTGAcacggtgcataatggtatccAGCAttcatgtgataaatgcggcAAGAAATTTTCGCATAAATATAATCTGAAAACCCACattgattcggtgcataatgatATTAAATATGCGTGTAACTTatgcgaaaagacattttcatCAAAGATTAATCTCAAGAACCACATTGAcacggtgcataatggtatccAGCAttcatgtgataaatgcggcAAGAAATTTTCGCATAAATATAATCTGAAAACCCACAtggattcggtgcataatgatATCAAATACTCGTGTGACTTatgcgaaaagacattttcacgaaaatttaatttgaagaCCCACGTCAATAAGATGCACATAGGTGTTACCTGTACATGTGGCATATGTGGAAAAACATTCATACAGAAGAGTCAACTAAAAATCCACATTGATTCGATGCATCACTCACGCATTAAAGGGCACATCAAATTCAATGTAAAAGGTTTGGAAAAGcaatag
Protein Sequence: MESGSLFNFTDRIKEEPADMSLIGNGCEMIDEKPDLKNFQLSPFPRENTNHNLRKCDENQETELGKAMEIVFECEDFKPKIDLPLVKQIVNYSPNHLQNLKDSDVCKSQKIIKMEHTQEVKQEIICEVTEESNSNFNCKFIEQNEKRRITKKFNNKNMLRTHIDRVHDKKNPACKVCGKKFSSKNYLKVHIDGVHKNVTHSCDNCGKKFTQRSSLNSHINSKHNGVSQACDICGKKFSYKSSLKTHMDSVHNGINYACDLCGKKFPLKTNLKTHIDSVHNGTKHKCDQCGKKFSQKSNLKTHINSVHDDNKYACDLCEKTFSLKTNLKNHIDSVHNGTKHKCDQCGKKFSQKSNLKTHINSVHDDNKYACDLCEKTFSLKTNLKNHIDTVHNGIQHSCDKCGKKFSHKYNLKTHIDSVHNDIKYACNLCEKTFSSKINLKNHIDTVHNGIQHSCDKCGKKFSHKYNLKTHMDSVHNDIKYSCDLCEKTFSRKFNLKTHVNKMHIGVTCTCGICGKTFIQKSQLKIHIDSMHHSRIKGHIKFNVKGLEKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485082;
90% Identity: iTF_01485082;
80% Identity: iTF_01485082;