Basic Information

Insect: Trichogramma pretiosum
Gene Symbol: -
Assembly: GCA_000599845.3
Location: NW:200570-203089[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.0019 0.14 11.7 3.7 18 44 142 165 135 165 0.93

2 17 0.13 10 5.8 5.6 17 44 197 221 184 221 0.86

3 17 0.0052 0.39 10.3 0.4 18 44 226 249 222 249 0.92

4 17 0.02 1.5 8.4 0.1 18 43 254 276 252 277 0.88

5 17 0.00051 0.038 13.5 0.2 18 43 282 304 280 305 0.91

6 17 0.049 3.7 7.2 2.2 18 43 310 332 308 333 0.92

7 17 0.00038 0.028 13.9 0.8 18 44 338 361 334 361 0.93

8 17 0.18 13 5.4 2.6 19 43 367 388 365 389 0.78

9 17 0.0001 0.0077 15.7 3.5 6 44 383 417 378 417 0.77

10 17 0.0071 0.53 9.8 1.8 18 39 422 440 420 444 0.84

11 17 0.0065 0.48 10.0 1.2 18 43 449 471 436 472 0.84

12 17 0.072 5.4 6.6 0.5 18 43 477 499 473 504 0.78

13 17 0.7 52 3.5 0.6 19 44 506 528 502 528 0.87

14 17 0.0074 0.55 9.8 1.8 18 44 533 556 529 556 0.91

15 17 0.0045 0.33 10.5 1.6 18 44 561 584 559 584 0.95

16 17 0.027 2 8.0 0.1 18 43 591 613 589 614 0.92

17 17 0.033 2.5 7.7 1.6 18 43 619 641 614 642 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.0019	0.14	11.7	3.7	18	44	142	165	135	165	0.93
2	17	0.13	10	5.8	5.6	17	44	197	221	184	221	0.86
3	17	0.0052	0.39	10.3	0.4	18	44	226	249	222	249	0.92
4	17	0.02	1.5	8.4	0.1	18	43	254	276	252	277	0.88
5	17	0.00051	0.038	13.5	0.2	18	43	282	304	280	305	0.91
6	17	0.049	3.7	7.2	2.2	18	43	310	332	308	333	0.92
7	17	0.00038	0.028	13.9	0.8	18	44	338	361	334	361	0.93
8	17	0.18	13	5.4	2.6	19	43	367	388	365	389	0.78
9	17	0.0001	0.0077	15.7	3.5	6	44	383	417	378	417	0.77
10	17	0.0071	0.53	9.8	1.8	18	39	422	440	420	444	0.84
11	17	0.0065	0.48	10.0	1.2	18	43	449	471	436	472	0.84
12	17	0.072	5.4	6.6	0.5	18	43	477	499	473	504	0.78
13	17	0.7	52	3.5	0.6	19	44	506	528	502	528	0.87
14	17	0.0074	0.55	9.8	1.8	18	44	533	556	529	556	0.91
15	17	0.0045	0.33	10.5	1.6	18	44	561	584	559	584	0.95
16	17	0.027	2	8.0	0.1	18	43	591	613	589	614	0.92
17	17	0.033	2.5	7.7	1.6	18	43	619	641	614	642	0.91

Sequence Information

Coding Sequence: ATGGAATCGAGTGATTCATTCGACTGTGCTGCGAGagtgaagGAGGAGCCTATCGACGtgttcatttttgaaaatcatggTGAAATGATTGACGAAAAACCCGATGTTAAAAACATCCAACTCTTCTCATTTCCACGAGAAACTACAACCCATATCCTACGGAAGTGTGACATTAAACTTGAAAGTGAACTTGACAACGAAGTGGAAATAGTCGTAGAATGCGAAGACGTCAAACCCAATAGGAATTTATTAGTGAAACAAGAAATCGCTGGTGTCGTTGCAGAAGAATCAAACTTGAATTTCGAGCTTGTTGAACAAAATGACAAGGCTacgaaacaaaatgaaaataccaaCAATGGTAACACTAGTGGAAAAATGCTTGCACCAAAGTGTATTCTCAAAATCCATAATGATGtcacacatacatgtaataCATGCAGAAATACGTTTTCACAAACAAGTACTCTCAAACGCCATGTCGATTCAGTGCACAATAAAGTCACTCACGCATGTAGTATTTAtgaaaagacattttcacaaaaaagtatTCTTAAATCACACATCCATTCTGTGCATAATGGCGTTAGATATGTATGTGATatgtgcaaaaagaaattctcagCGAAGGGTAatctcaagaaacacatcgataaggtgcataataaaatcattcatgaatgtgatatttgtgaaaTTACGTTCTCAGGCAAGAGTAATCTCAAGAAACATATTGATGTAGCGCACAATGGTATCATCTATAGCTGTAAGACATGTGGTAAGACATTTGCACGACCAGGTGTTCTCAAACGCCATATCAATTCGGTACATGACAAAATCACTCCTGAATGcaatatttgcggaaagaaatacTCAACCAAGAGTGACCTCAAAACACACATCGATGTGGCGCACAATGGTATCACCCATAGATGTAAGACATGTGGTAAGACATTTGCACGACTGTATGTTCTCAAACGCCATATCAATTCGGTACATGACAAAATCACtcatgaatgtgatatttgcggaaagacataCTCACAAAAGAGTGAACTCAAAAGACACATTGATGCAGCGCACAACGGTGTCACTCATGCATGTAgtatttgtggaaagacataTTCACATAAGATTAccctcaaaaatcacatcgatttggtgcataataaaatcattcatgaatgtgatatttgcggaaagaaatacTCAAATAAGAGTAatctcaagaaacacatcgaTGTAGCGCACAATGGTGTTAGACATGAGTGtaatatttgcggaaagacattttcaaaaaaaagtagtctTAAAACACACATTGATGCACACAATGGTATGGCCCCTATTTGTAAGACATGTGGTAAGACATTTGCACGACTGGATGTTTTGAAACGCCATATGAATTCGGTACATGACAAAGTCACtcatgaatgtgatatttgcgggaAGAAGTACGTACAGAAGGGTgatctcaaaaatcacatcgatGTGGCGCACAATGGTAGCACGCATGCATGTGATACATGCGATAAGACATTTGCACGATTGTATATTCTCAAACGCCATATCAATTCggtacataataaaatcattcatgaatgtcatatttgcggaaagaaatacTCAGATAAGAGTGatctaaaaaaacacatcgatgtggcgcacaatggtgtcacccATACTTGTGATATGTGCAAAAAGAGTTTCTCAGACAAGAGTAatctcaagaaacacatcgattcggtgcacaatgCGCATGGTATTGCCCCTATTTGTAAGACATGTGGTAAGACATTTGCACGATTAGATGTTCTCAAAcgccacatcgattcggtacatgataaaatcattcatgaatgtgatatttgcggaaagaaattcttaCATAAGAGAaatctcaaaaagcacattGATTCGGTACATGATAAAGTAGTGTAA
Protein Sequence: MESSDSFDCAARVKEEPIDVFIFENHGEMIDEKPDVKNIQLFSFPRETTTHILRKCDIKLESELDNEVEIVVECEDVKPNRNLLVKQEIAGVVAEESNLNFELVEQNDKATKQNENTNNGNTSGKMLAPKCILKIHNDVTHTCNTCRNTFSQTSTLKRHVDSVHNKVTHACSIYEKTFSQKSILKSHIHSVHNGVRYVCDMCKKKFSAKGNLKKHIDKVHNKIIHECDICEITFSGKSNLKKHIDVAHNGIIYSCKTCGKTFARPGVLKRHINSVHDKITPECNICGKKYSTKSDLKTHIDVAHNGITHRCKTCGKTFARLYVLKRHINSVHDKITHECDICGKTYSQKSELKRHIDAAHNGVTHACSICGKTYSHKITLKNHIDLVHNKIIHECDICGKKYSNKSNLKKHIDVAHNGVRHECNICGKTFSKKSSLKTHIDAHNGMAPICKTCGKTFARLDVLKRHMNSVHDKVTHECDICGKKYVQKGDLKNHIDVAHNGSTHACDTCDKTFARLYILKRHINSVHNKIIHECHICGKKYSDKSDLKKHIDVAHNGVTHTCDMCKKSFSDKSNLKKHIDSVHNAHGIAPICKTCGKTFARLDVLKRHIDSVHDKIIHECDICGKKFLHKRNLKKHIDSVHDKVV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485043;
90% Identity: iTF_01485043;
80% Identity: iTF_01485043;