Tpre007907.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- -
- Assembly
- GCA_000599845.3
- Location
- NW:498043-500947[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9e-08 1.7e-05 23.9 0.0 3 35 58 91 56 96 0.87 2 2 6.2 5.5e+03 -3.3 0.0 2 13 133 144 133 145 0.86
Sequence Information
- Coding Sequence
- ATGGGTTATactaaaaagagtaaaaaaaatcaaaagaaagatgtaaagaaaaaagtcgtgAAGAAAAATACGGCCACCAATTCAACGAAGAAGAAAGTAACCAAAAAAACTGGCAGCAAGGCTGCTGCAGTAAAGAAAAACCTGAAGGTACCTAGAAAATTATACAGTTCAACAGCTCTAGAAAAAGCTGTAAAAGCCgtaaatgaacaaaataagTTATCGTTGAGGGAGGTTGCTCAGGCATATGGGATTCCTGTAACAACTctattcagaaaaaaaagcaatccTGATGCTTTGCATACAAAGCCTGGACcagataTTGTTTTGTCTAATGAAACAGAAAAGAATATTGCTGACTGGGTCGTGTATAGAAACCAAACAGGTTTCTCTGTCAACAGGGACCAGTTGTTAGATGCAGTTGCTTCATGCGTCAAAATTATGAAGTTGAAAACTCCTTTTATAAATGACCGACCCGGAAGACATTGGTTTGAGAAATTTCTTAAGCGTTATTCagatttatcaattaaaagaACGCCGCGATCGGACAGAAAAAACAAGGCTAAAGTAACCAAAGACGATGTAGAGGGGTGGTTTTGTGCAATACAAAAGTActtgaactcgaaaaaattggTAAACATCAGTGCGGATAGAGTGTTTAATTGTAAAGAAGCCAGTGTATCCGTGGATCctaaaatagaaaatgtcGTAACCACGAAAAGAGATTGCACTGAGGGTAACGTCGGCGATGCTGACGAAACACgcttcaatattttatgcatGTATAGCGGAATGGGTATTCGTGCTCCACCGATGATAATGTATAACAAGGAAGTGTCAGAAAGtgtagtaaaaaatttacctgaaagGTGGGGCACCGGACTGTCAGAAAATGGATGGATGACAGCTGAGTCTTTTTATAAGTACATATGCGACATTTTTTATCCGTGGTTGGTGAAGGAAAAAGTCCAATTTCCAGTAATTATCTATGCTGACAACCACCTCTCATACTTCAGTATTCCTCTGGTGTCTTTTTGtcgggaaaaaaatattgaaattcttGGTTTAATCCCTAGCAGTACACATATTATCCAACCTCTGGATATATCATTTTTCGAAAGTTTCGAAGAGAGTTGGAAAAATATAGTGCTCcagaggaaaaaagtaaataaagtgTCGGAATTAAAAGAAGTACATTATGGAAGAGTCGTTAATTATGCATTAGAGAATATGCCCAATGAAATAGAAAGTGTGGTAAACGGTTTTGAAGCATCTGGTTTGGCTCCGTTTAATCCACTTGcagtaaattatattttcgcaaAACGAGTCAAAACTTCACAACAGAcacctcaaaatcaaattcaaaatgtcCACGAAGAAGAGAGTGTAGTTAACAATGAACAAACAAACAGTGAAATGCTACGTCATTTGGAAGCTAGTTTGGCTCCAGATGTATTAGAAAAGTTTGAGTTTTCAAAAGATATTGGTTTATGGGCAGGTGATATAGAATTCAAAGCTATGTTCGAATACTGGCTACGACTGAAAAGCCCTTCCACTAGTCAATTTTACTCGCAGCATTAA
- Protein Sequence
- MGYTKKSKKNQKKDVKKKVVKKNTATNSTKKKVTKKTGSKAAAVKKNLKVPRKLYSSTALEKAVKAVNEQNKLSLREVAQAYGIPVTTLFRKKSNPDALHTKPGPDIVLSNETEKNIADWVVYRNQTGFSVNRDQLLDAVASCVKIMKLKTPFINDRPGRHWFEKFLKRYSDLSIKRTPRSDRKNKAKVTKDDVEGWFCAIQKYLNSKKLVNISADRVFNCKEASVSVDPKIENVVTTKRDCTEGNVGDADETRFNILCMYSGMGIRAPPMIMYNKEVSESVVKNLPERWGTGLSENGWMTAESFYKYICDIFYPWLVKEKVQFPVIIYADNHLSYFSIPLVSFCREKNIEILGLIPSSTHIIQPLDISFFESFEESWKNIVLQRKKVNKVSELKEVHYGRVVNYALENMPNEIESVVNGFEASGLAPFNPLAVNYIFAKRVKTSQQTPQNQIQNVHEEESVVNNEQTNSEMLRHLEASLAPDVLEKFEFSKDIGLWAGDIEFKAMFEYWLRLKSPSTSQFYSQH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482326; iTF_01483772;
- 90% Identity
- iTF_01483772;
- 80% Identity
- -