Tpre002973.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- bab1
- Assembly
- GCA_000599845.3
- Location
- NW:495449-688829[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.7e-17 2.4e-14 52.2 0.0 1 43 447 490 447 492 0.95 2 2 3.3 2.9e+03 -2.5 0.8 6 15 577 586 573 587 0.87
Sequence Information
- Coding Sequence
- ATGACGGCGACCGAGCAGCTGAGCGGCGCCGGCTCGCCCCAACAGTTCTGCCTGCGCTGGAACAACTACCAAACGAACCTCACCAACGTGTTCGATCAGCTGCTGCAGTCGGAGAGCTTCGTCGACGTGACGCTCGCCTGCGACGGCAACTCCGTCAAAGCTCACAAGATGGTACTGTCGGCCTGCAGCCCGTACTTCCAGACGCTCTTCTGCGACAACCCGTGCCAGCATCCGATCGTCATCATGAAGGACATCAAGTGGCCAGAGCTCAAGGCCGCGGTCGAGTTCATGTACAAGGGCGAGATCAACGTGTCGCAGGAGCAAATCGGGCCGCTGCTCAAGGTCGCCGAGACCCTGAAGATCCGGGGCTTGGCCGACGTCGGCAGCGAGCACGAGCTCGCCAAATCGGCCGAGGACCAGCTGAGCGTGGCCTCGGTGAgggccgcgcgcgagcagcaacgcgaccgcagcagcagcgatcagcagcagcgaaaaaagCGCCGACACATGAACTCGCTGGAGCGATCGCCGAGCAACGGCAGCCCGGAGCTGAGGGCCGCCTCGGAGGAGCGAGACTCGGCCAGCACCGGCGGCCAGGAGAGTCTGCACGGCGGCCTCGGGGGGCCCGGCTCGGCCTCGACGCCTCGCTCCCTCGGTTCGCCCAGCGTGCCCAGCATCTCCGTGACGCCCCAGATCAACCTGCACGAGCTGCCGGGCAGTCTGGCCCTGAGCCTGCAGTCGGGCTCGTCGACGCCCCACGGCATGTCCTCGTCCACCTCGGCGCAGTCGCAGGCGGCGGCCGCCTCGCTGCTCGTCGGTCATCACGTGGCGCCCGGTGTGGCAGCCGCCGCTGCGGCCGcggcagctgctgccgccgcagCCGGTCACGTGACCCCGGCTAGCACGCCGGTGAACCACCTCAACGCCCACGTGGTGGCCCAGCAACTGTCGGctgcccagcagcagcaccgccagcaggagcagcagcagcaacagcagcagcagcaccatcggggccagcagcagcaacagccgaCCTCGCAGGAGCCGCATCATCATCAGTCGTTagtgcatcatcatcatcatcagcagccgcagcagcatcaccCGAGTATCGGTGACGATCTCGAGATCAAGCCTGGCATCGCAGAAATGATACGCGAGGAAGAAAGGGCCAAGTTGCTGGAATCGTCCCACGCCTGGCTCGGAGCATCTACCTCTAGTATAGCAGACAGTTACCAGTACCAGTTGCAGTCGATGTGGCAAAAGTGCTGGAATACCAATCAAAGTCTCGTGCACAATCTGCGCTTTCGCGAGCGAGGCCCGCTCAAGTCCTGGCGCCCGGAAACGATGGCCGAGGCAATTTTCAGCGTGCTGAAGGAGGGACTCTCGCTCAGCCAGGCGGCCAGGAAATACGATATTCCATACCCGACGTTCGTACTTTATGCGAATCGAGTTCACAACATGCTCGGGCCAAGCGCTGATGGTGGAGCGGATTGTATGATTGCAGACCTACGGCCAAAAGGTCGAGGTAGGCCACAGAGGATTTTGCTCGGCATCTGGCCGGACGAGCACATCCGCGGCGTGATTCGCGCGGTGGTCTTCCGCGACGGCCACTCGCCCCATCACATGGTCAAGGAGGAGCAGCAGCCCATGTATCCGGCGGCGCTTGCGAATTACGCCGGCGCCTGCAACGGACCCGAGGGAGCGGTTAGTCCCTcggcagccgccgccgcggtcGCAGCCGTCGCTCAAGGTTTGAGACATCAGATGTGCAGTATGGTGGCTGCGGCCCACTCTCAGCACGACATACTCTCGGCGACGAATCTCTCGACGAGTCTGTCGTCGAACCTCCAGGCGGCCATGCAGCAGGCCAGTCAGCAGCAAGCGGCGGTAGCTCAACAGCATCAAGCGGCCCAAGTGGCCCAGCAGCAGGCCGCCCAACAGCACCAGCTTCACCAGcaactacagcagcagcagcaacagcagcaacagcaacaacagcaacaacagcaacaacaacagcagcaacagtcgcAGTCTCAATCGCACCATCACCTGCATCACAACAACAGCGGCAATTCGGCTTTGGGAAGCGGAAGTATGTTGCCACCGAGTGCGACACCGACCCCCGCGTCTCACGGTAATTCGCCATTGAATCTCGGTCTGGGCAGTCCTGGCTCGGGTGGACCTCCGGAATCGCCACTCGAGTCGCCTCTGGCGTCGCCGCTGGGCGCCCTGATGGAGGGAGCCGCGGCCCACCTGACGTCGAGCGTCGAGGTAGGCATCGGCGTCAGCGGCATGGCAGCCGCATACAAACCGTCGTCGCGCAGCTTCGTCAGTCCGCGACCCGAGCCGCTTTTCCAGGAGGATCTGTCGGAGCTTGTGAAAAGCTCGCACGCGGCCCTCAAGGAGAAGGACAAGATCGCCGTCAAACTCGAGCCCCTGGCCGATTCTCGGTGCGAATAG
- Protein Sequence
- MTATEQLSGAGSPQQFCLRWNNYQTNLTNVFDQLLQSESFVDVTLACDGNSVKAHKMVLSACSPYFQTLFCDNPCQHPIVIMKDIKWPELKAAVEFMYKGEINVSQEQIGPLLKVAETLKIRGLADVGSEHELAKSAEDQLSVASVRAAREQQRDRSSSDQQQRKKRRHMNSLERSPSNGSPELRAASEERDSASTGGQESLHGGLGGPGSASTPRSLGSPSVPSISVTPQINLHELPGSLALSLQSGSSTPHGMSSSTSAQSQAAAASLLVGHHVAPGVAAAAAAAAAAAAAAGHVTPASTPVNHLNAHVVAQQLSAAQQQHRQQEQQQQQQQQHHRGQQQQQPTSQEPHHHQSLVHHHHHQQPQQHHPSIGDDLEIKPGIAEMIREEERAKLLESSHAWLGASTSSIADSYQYQLQSMWQKCWNTNQSLVHNLRFRERGPLKSWRPETMAEAIFSVLKEGLSLSQAARKYDIPYPTFVLYANRVHNMLGPSADGGADCMIADLRPKGRGRPQRILLGIWPDEHIRGVIRAVVFRDGHSPHHMVKEEQQPMYPAALANYAGACNGPEGAVSPSAAAAAVAAVAQGLRHQMCSMVAAAHSQHDILSATNLSTSLSSNLQAAMQQASQQQAAVAQQHQAAQVAQQQAAQQHQLHQQLQQQQQQQQQQQQQQQQQQQQQQSQSQSHHHLHHNNSGNSALGSGSMLPPSATPTPASHGNSPLNLGLGSPGSGGPPESPLESPLASPLGALMEGAAAHLTSSVEVGIGVSGMAAAYKPSSRSFVSPRPEPLFQEDLSELVKSSHAALKEKDKIAVKLEPLADSRCE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01484774;
- 90% Identity
- iTF_01484774;
- 80% Identity
- iTF_01484774;