Tpre008870.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- bab2
- Assembly
- GCA_000599845.3
- Location
- NW:327430-368349[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.3e-12 1.2e-09 37.2 0.0 1 39 537 576 537 580 0.90 2 4 4e-12 3.6e-09 35.7 0.1 2 39 592 629 591 632 0.94 3 4 1.5e-18 1.3e-15 56.3 0.0 2 45 647 691 646 691 0.97 4 4 1.8e-17 1.6e-14 52.8 0.0 1 42 698 740 698 741 0.97
Sequence Information
- Coding Sequence
- ATGGTCAGCGGAGGGATGGCCGGGCAGCACTACTGCCTGCGCTGGGACAATTACCAGTCAAACATGACGTCGGTGTTCCATCAGCTGCTGCAGAACGAGGCCTTCGTCGACGTCACCTTAGCGTGCAACGAGGCCTCCCTCAAGGCCCACAAgGTCGTTCTGTCGGCGTGCAGCTCGTACTTtcagaagctgctgctgtccaaTCCGTGCACGCATCCGACCATCATCATGCCCCAGGACGTGTGCTTCAATGATCTCAAATTCATCATCGAGTTCGTCTACAAAGGCGAGATCGACGTGACCCAGGCCGAACTGCAGTCGCTGCTGAGAACGGCGgatcaattgaaaatcaagGGCCTGTGCGAGGTGTCGGCGGAGACCGGAGGCGGCGACGTAATCGGCCCGTCGGCGGTCAGTCTCAGCACGCCACCGGCCGACTATCTTCCCCATCATCGTCcccatcatcaccatcatcggGCCTCGTCGCCGTATCGTCATCGCTCGTCGGGAGGCAGGCGCGAAGGGTCCGCCGCCGGTGGTGGTAGCCTGTCCACGCCGCGCCTGAACTGGACCAAGTTCGGCAAGCATCAGCGCACCTCGCCGTCCTACAAGCGATCGTCGACGCGCAAGTCCTCCGCCGCATCGCAGGCCGCAGCCTCGTCTTCCTTTCTGCAGCCCCAGCCGGCCCACGAGGCGACGAGTCGCGCCGCGGCTCGCCACCCCAGACACATCGCCtacaattattatcatcacAGCCAGTTGGACACCAAGGCCAAGTACAAGcaggaggaggacgacgacgaagacgacgaagaggTCTACGCGCGACTTTGCGCCAAAGAGAATCGACAGGACTGCTGGTCAGGCAACGACGAGGATGACGAGTGCATGGACACGACCGGCCGAGCCAACGTGCCCGCCGCAGCGAGTACACCACTAGTCGTGCTCGACTCCAGCCCGTCcatcatcaacaacaacaacaacatcaacaagagcaacaacaacaacaacaacaacaacgagaaaaaattaacgacGACCAACGGGGCCGCAGCCGGCGCCGCCGATCACCCAGACGACAGCAACCGAaggaacagcagcaacagcagcagcagcggcggcagcagcagcggtgccagTCCCAGCAGCGCCAACAATAACGCAGCCACCAAAACGAGCAACAACGGTGACATGTTTTGTCACACGGGCCTCGGCCACTATGGCCACCACACGGATCCGGGCGAGGTCGACCTGCCGCCCGAGACTCAGCCCACGCCACCGAGCGCGACCCTCGTCGGCACGACCACGACGCACCTGCGGGATCCCGACAACCACACGACAGATATCCAGAACTGCGACAACGACGTGAAGGTCAAGTTCGAGACCCTGCAGACGATGGACTCGTCGGACACGATCGACATCGACAGCCACATGTCCGACCGGGCGAGCGTCAGCTCCAAGGCCGACGACAACATGATGATGATCACGCCGGAACTGCTGGGCCTGATGCCCTCCGGCAGCTCGATACACTCGGACTCGCCCGGCGGCGAGAACAATTCGCGAAATCACTCGCAGTCCGGCTCGCATCATCACGGATCCAAGTCCTGGACGCAGGAGGACATGGACGCCGCGCTCGAGGCTCTCCGAAATCATGACATGAGCCTCACCAAAGCTTCTGCCACCTTTGGGATTCCATCGACGACGCTGTGGCAGCGGGCCCACAGGCTCGGCATCGACACGCCAAAAAAAGACGGACCGACCAAGTCGTGGAGCGACGAGAGCCTCAACAACGCCCTGGAGGCTCTGCGCACGGGCACGATATCGGCCAATAAAGCTTCTAAAGCCTTCGGCATACCTTCGAGTACTCTGTACAAAATAGCCAGGCGAGAAGGCATAAGATTGGCCGCGCCCTTTAACGCGAGTCCCACGGCTTGGTCCCCGGCTGATTTGGACAGAGCACTCGAGGCAATCCGATCCGGTCAGACCTCCGTGCAACGAGCTTCCACCGAGTTTGGCATACCTACGGGTACGCTTTACGGGCGTTGCAAGAGGGAGGGTATTGAGTTGAGCAGGAGCAATCCTACGCCCTGGAGCGAGGACGCTATGACCGACGCCTTGGAGGCTGTGAGATTGGGGCACATGAGCATCAATCAAGCGGCGATACACTACAATCTACCCTACTCATCGCTCTACGGGCGCTTCAAGCGCGGCAAGTACGAGGAACCGGTCATGTCGCAGAACGAGATGTCCCAGGACGGATCGTCGCAGCACTTTCACCATCCGAGCCCGACGCAGAACAATCACACGTCGCCGCTGCCCGAGCAGATGACCTACCAGGGCAGCTGA
- Protein Sequence
- MVSGGMAGQHYCLRWDNYQSNMTSVFHQLLQNEAFVDVTLACNEASLKAHKVVLSACSSYFQKLLLSNPCTHPTIIMPQDVCFNDLKFIIEFVYKGEIDVTQAELQSLLRTADQLKIKGLCEVSAETGGGDVIGPSAVSLSTPPADYLPHHRPHHHHHRASSPYRHRSSGGRREGSAAGGGSLSTPRLNWTKFGKHQRTSPSYKRSSTRKSSAASQAAASSSFLQPQPAHEATSRAAARHPRHIAYNYYHHSQLDTKAKYKQEEDDDEDDEEVYARLCAKENRQDCWSGNDEDDECMDTTGRANVPAAASTPLVVLDSSPSIINNNNNINKSNNNNNNNNEKKLTTTNGAAAGAADHPDDSNRRNSSNSSSSGGSSSGASPSSANNNAATKTSNNGDMFCHTGLGHYGHHTDPGEVDLPPETQPTPPSATLVGTTTTHLRDPDNHTTDIQNCDNDVKVKFETLQTMDSSDTIDIDSHMSDRASVSSKADDNMMMITPELLGLMPSGSSIHSDSPGGENNSRNHSQSGSHHHGSKSWTQEDMDAALEALRNHDMSLTKASATFGIPSTTLWQRAHRLGIDTPKKDGPTKSWSDESLNNALEALRTGTISANKASKAFGIPSSTLYKIARREGIRLAAPFNASPTAWSPADLDRALEAIRSGQTSVQRASTEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMTDALEAVRLGHMSINQAAIHYNLPYSSLYGRFKRGKYEEPVMSQNEMSQDGSSQHFHHPSPTQNNHTSPLPEQMTYQGS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483988;
- 90% Identity
- iTF_01484797;
- 80% Identity
- iTF_01484797;