Basic Information

Gene Symbol
Arid4b
Assembly
GCA_000599845.3
Location
NW:239274-249483[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 5.2e-25 9.2e-22 76.7 0.1 2 89 322 408 321 408 0.95

Sequence Information

Coding Sequence
ATGTCTAACAATTTGCAGGGTGACGAGCCGGCATCTTTATTAGTTGGCACTGAAGTTAGTGCAAAATACAAAGGAGCATTCTGCGAAGCAAAAATTAGCAGAGTGATTCGACACGTAAAATGTAAAGTGACTTTCAAAAATGGTCTTGGAACTACTACTATAGAAGATACAGAAATTAGTGGGACGATTAAAGTTGGTGCTCTGGTAGAAGCTAACCATCCGACAACCAAACAATCTAGTGAAgctataattaataaaattactgaTGCTAGTCAGTACACAGTTGTTTTTGATGATGGTGACATTACTACTTTGAGAAGAAGTGCTTTATGCTTGAAAAGTGGCAGGCATTTTAATGAAAGTGAAACTTTAGATCAATTGCCCTTGACGCATCCAGAACATTTTGGTAATCCTGTTATTGGTGCTAGGGGCAGAGGTAGAAGGTCTAAGCCAACTCTagaTGACAGTGAAGGTGAAGATGACCCACAATTGCAACTACAAGATGACGATGACAACAGCAAAAGTAacaatgattcaaattttgccAATAAAGAAGATAAAGAAACACAACCTGAAGCTGGAAAGGTAGTTTGCATTGAAGCTTtggaaaaacagaaaaaaaaagaaagttggTTTCCTGGAGTTATTGTGGCTCCAAGTGCTCAAACATCTATTAGATACGATCATGAAAGAGAATATCTAGTGAGATCTTTCAAAGACGCTAGATAttATTCTGTTCCTAAAGATGAAGTTTTTGATTTCACAAAAGATATATGTAATGATGACAAATTACCAGCTGCTATAAAAGGAGCTATTGAAAAAGCATGGCTTTTTTTGGAACAAAAAGAACTGCCGCCGCACTGGGATAAACACTCAATATTTGGAGACTCAGTATCATCAGAGAATGATGATACTGAGATTGATCAACAAGATgagaaGTCAGACGAGGAATCTCTTCAACAGAATGATCTTTTTATAgctcatttatataaatttatggaTGATTGCAATACTCCACTGGATAGATATCCTGACATTGAAGGAGAAGAAGTTAATTTCTACAAATTATACAATGCTGTATCAGGTCTTGGTGGCTATGCCAAAGTTACTACCAGTAATCTTTGGAAAAAAGTCACTCGAACTTTGAAACTTCGTGCTGGGTGTAGTGAAACTGCATGTAATCAAGtacaaaaagtatacaaaaagtACCTTGCCAACTTTGAAGATATTCGCAAAAAATTAGGATGTACAATGTTGACCCAAACTGGCACAAGTACTAGTACAAGAGGTGTTGGTCGTAAGCAAAAGTCAGCTAGAGGTTTAACCAAGGATAAGGATAGAAGTACACCTCCTCAAACGGAAAAAACACTagtgaaaactgaaaaagatgacgaagaaaaagaaaaaaaaccatctcAAACtattgaagaagaaaaaaaacgtgacgcaaaaaaagaaacagtaATTAAAGAAGAGGATGTACCACTttcaaaaataaaaaaaaaggaacaagtGGATGACAGTGCTAGTGGAGGAGATAgtgatataaataatgaagGAGAAGAATCATCCTGCAGTGAAAGATCTCAAAAGAGTATGTCCAGACTCACTCCATGTAGTACCATCTCAAATAGATCAAGAACTTCTCGTGATACCAAAGAAACCAAGAGAAAACTGCcacaagataaaaaaaaaagtgaagctAGTAAACGTCAggacaaaaaagaagataaaagtaaagaagaagaTAATACTAAAACAAGATCTAAAATTGCAAAAGATGATTCCCATGGCAAACTCCAAAAAACTAATACTGAAGTCAGAGAATCTCGAATAACAACATGTGATACAGATAAAAAACCATTGgctggaaaacaaaaaaaatttactgatGAAGAGCTgaagaaaagaggaagaaaaaagaaagaggttGAAACTGGAAAAAACTTGCAAAGTCCAGAAGAAGATTTGACTCAACATTATAAAGGGCCTGTTGCAATTGGTGATAGATTGAAGGTCATTTATGGACCAAACCAAGATCAAAAGATCACTTATGAAGCAAAAGTGgttgatatagaaaataacatcCCTGATAACCCTGCTTACCTTGTTCATTACACAGGTTGGAAtacaagATATGATGAATGGATCAAAATCGATCGTATTGCTGTTAATTATTCTCAGCAAGGATCAGGACGTTCTAAAAAACCAAATAAGGATAAAAACACTCCACAGACTCGTCCACAGACACCAGGTTCAACTCCGAGAACTTCAAAAGTATCTGCAAGTGCTAATACAAGTAGTGTACCTGGTATGAGTAGTCGCCGTCGCATTCAAAATGATTCTTCAACTGCCAATTCTAATAAAGATTCGCGGAAAGATGATCGGGAAACGACGCTAGCAACTACTCGATCAGGCACACCGTCTCCGTTGATATCACGAACGAAAAGTCCCGCATCTACTGGTAGACCGACTAGGATGACGCGAAATCTAACAGAGGTAAATGAAGGGCGAGGATCAAGAAAAAGGCTCGAAACCGACGATTCAGATTCCTCCGATTCAGATGGAAGTGATTCACCGGTTATCCCCATCAAACCTCGTCGACGTAACTGTGAGACTCGTGAAGCAAGGAAGCGAGCTGAAAGTAGAATGAAAGTTGATGAAAATAGTGATATTGACGAAGATAAAGAAATTGAAGAGCCTAGGAGAGGAAGGCGCTCTAGGAGGACTCTTGCAAAAATCACAGAAATCAAGAGTGAACCAGAAAGTGAGACCGAGCAACCCAAAGGCTGTGAATTTGATCTAAATCAAATTAGATCGGAATTGAAGGGTTTTGATAAAGCGGTAAAAATTGAGATGTCATCAACTTCTACATCCCAAgagcaagaagaagatgaagaagagaaaaaatcaaatattattaaacaagAAAAGTCTGAATTAGATGAAAAGAAgGCATCACTTGACAATGATAGTAAAATTTCCGACAAACAAGAAATATCTACTTTGCCAATCAAGCAGGATGTAGTTAATACTGAAGCAGTCCCTGAAAGTACAGAAGATATATATGAATTCAAAGAACCCGAGCCATTTGAATTTGAAGTACGTAATAAGAGAGATTCTAGTGGTAGTGATAAGCCAGAGAAGGATAGTAACAAAGATTTAAAGGATAAATCTACTGCTGCTTCTCCTGCATCTATTGTAAAGAAACGTCCAGTTGAAGATGAATTAAAAAGTCCTAAAAAGAGACTTAAAACTTCAGTAACTTCGAGTCaatcaccagcagcagcagcaacaacaaaagaTAGTAAGCCTGATATCAATCGAAGCGCAACGCCTGTTGAGACAATTGTTCCTGCTGATGCTAAAAAAAAGACGactcgaaaaatattcaataaatccGATGATACAGAGAGTACAGAAGGTGAAGAAAGCTTAAGTTTAACAAGTTTATCACCAACTAAATTTTATCCAAGTACTAGTTATCCTGGTGCTACAGTTATTAGGCGACATAAAATTTCTACCGAAGAAGAGATAGGATCTAGTCACCATGAAACTTCTACAGaaagcacaaaaaataaacgtttattattaaataaaactaCACCTATTAAAGCACCAGCTGATCATAAATCTGAAGAGCAAATTGGggatgaaacaaaaaagaaaagtattaaACCGAAAGCGCTTGATTTAGATAAAGGAAACAAGGAAACCAAGGAAATTCCATCATTCTATATTCCAGCTAAGGTAATTGAAACCCGAGAAGAGGAACAGAAACCATCtgttaaaaagaaaacgaaaaccCAAGATCCATCTACTGTTTtggaaacgaagaaaaaacaagcAGTGGTCCGCCAGCCACCCACACGTAAGGACCGTCGCTCTAGTGAAGAAagtgacagcagcagcgatattGAAAGCATCAGCACTCGTGATCCgtcaaagtatttttcgcaGTACTCAGGGCCCAAAACGAAagcagctgctgctattgccaGCGAGTACGAGAGCCTCAATAATAAGGTGGATGCTCAGAGCGGGGAGAAACGCACTGAGCCAGTTCAGAGTATAGAGAAGAGTCAATCAAATGCAACTGCAACGGTTACAAAATCTTCAAGTGTAGAACAAAAATCTGAACATACAATGAGTAGTGCCCCAGCGCCTTTAACCGTGCCTCCACCAATAAGCGCACGTTTACCTGCTACAGCCACCATTGAAGAAAAGCTATCCGCAGCCGCTGTTTTTCACAGAAGACAAATGATTGAGtcaaaaaaggaagaagaatcAAAACAAGACCGCAAGGTAGCGAAAGAGATTCCCAAAAAAACTCATGGAGTTTCTTTTAACGCCACCAAAAAAGTCGAGGCTAAACTAACTCCTGAaccagaaaagaaaaaagtggaaGCACCATTGATAATTCCCATCAAAGACCCCCTTCAAGAAATTGAAATCCGCACGGATCCTTTACTCGAGATAATGAAAAGCAAAGAAGAGGAGCTattaaaagctaaaaaaagtatagaagAGCAGAAGCCGCCAATTAATGTGATAAAAACTTATCAGCGTAAAGAGCCACCCTCAAAGCCTGAAGAATCGTGGAAAAAGGTAACATCTACGACAGTTATCAGTGACCAACTAGCGGCGGTCACTAGCACAGGTCGAAAGGAGCCTTTTGTTAGCCGCATCAAACCCCTCGAGCGAAGCGAATCCGTTGATTCTACCGATAGCAGCGATTCGGAAAGAAGGCTTACAATTATCGACGAAGATTACACGGATGAGGCAGGGCCGGaacaatcaaaaaaatcgagccaTTCGGAACAGAGTTCTTCGGTGACCACCAATGCCCAAAGAGACTTGCAAGCTGATATTATCAATACGATGATGCAGACTAAACTAGTCACGAAAATGGATGAAGACGGCGAAAATATCAATTCGTTGCTATGTGAGGAAGAAATACCGGGTTCACCGACACCCGGGGCAGATAGTCATCATGAACATCAGGAGAGATCTACTTCAAGCAGTTCGCAAAATGTATTCAAATCTGATTTAGGTAGCAAAGCGGCTGTTGCGTTTGTTGCGGCCCAGTTACCGTTGACTATTCCGTCAACAACATCTGTTTCCACCCTCGTTAGTTCCAGCCTGGAATCATTAAATGCGGGTAATGGAAAAAGTATTACTTCTATAGCATCCAACTCGCCCGTCAGTGTACTTACCACCACATCAACTTCACATTTGTATGTAACGACTGTCGTAACTACAACTACTGGATCTGCGCCGTCACCCACGCATTCGCATTCTAATCAACGAAGAGATAGTAATGTTGAACCTATGGAGGTTGACGTAGCACCTGTTGCGCTGGATTTCAACAATTCCAGTATAACTATTCAACGTGTTCCGACTCCCTCGTTATCTTTGGACAGCGATTCGAAAAAAGACAGTATGGAAGTCGATAATGATGCTCTAAGTAAATCCGACAATCCTTCAACGAGCACTGAAAACGTTTCCGAAGATACTAAAATTAAAGGAGCAATGAAAAGAACAAGTAGTATTACAAGTGCCGATGAAGTTGAAAATGTCTCGCcaaaaaaacgagcgaagCGTACGGGAGTTCAGCAGACAAGTTTATCGGgatctgtaaaaaaatcaccgagacagaattcaaaaaatcgaagatCTACAACCAGAAGTGATACTGATGACTCAGATGAAGAGCAAGCAACTCCTCAAGTTCCAAGGTATATTCGAGGTGTACTTACCAATACAACAGTGGTACCACCAAGAAAATTACCAGAGCCTACAAATTATAACAAGTCACCTCGTAAGTATTCTCCTGAATTTGATAGTAATGCAAGAATAgcttatttaaataaacaattaagcGGGACTATAAAAGAATATAATGAGTACAAAACTGTAAATATTAAAGTTGACCGTATTAGAAGAAAactgaaaaagaagaagtctCGTGAAGGTCCAAAAAGCAAAGATGATAGCGAGCAATCTGCGCCAACTCAATAA
Protein Sequence
MSNNLQGDEPASLLVGTEVSAKYKGAFCEAKISRVIRHVKCKVTFKNGLGTTTIEDTEISGTIKVGALVEANHPTTKQSSEAIINKITDASQYTVVFDDGDITTLRRSALCLKSGRHFNESETLDQLPLTHPEHFGNPVIGARGRGRRSKPTLDDSEGEDDPQLQLQDDDDNSKSNNDSNFANKEDKETQPEAGKVVCIEALEKQKKKESWFPGVIVAPSAQTSIRYDHEREYLVRSFKDARYYSVPKDEVFDFTKDICNDDKLPAAIKGAIEKAWLFLEQKELPPHWDKHSIFGDSVSSENDDTEIDQQDEKSDEESLQQNDLFIAHLYKFMDDCNTPLDRYPDIEGEEVNFYKLYNAVSGLGGYAKVTTSNLWKKVTRTLKLRAGCSETACNQVQKVYKKYLANFEDIRKKLGCTMLTQTGTSTSTRGVGRKQKSARGLTKDKDRSTPPQTEKTLVKTEKDDEEKEKKPSQTIEEEKKRDAKKETVIKEEDVPLSKIKKKEQVDDSASGGDSDINNEGEESSCSERSQKSMSRLTPCSTISNRSRTSRDTKETKRKLPQDKKKSEASKRQDKKEDKSKEEDNTKTRSKIAKDDSHGKLQKTNTEVRESRITTCDTDKKPLAGKQKKFTDEELKKRGRKKKEVETGKNLQSPEEDLTQHYKGPVAIGDRLKVIYGPNQDQKITYEAKVVDIENNIPDNPAYLVHYTGWNTRYDEWIKIDRIAVNYSQQGSGRSKKPNKDKNTPQTRPQTPGSTPRTSKVSASANTSSVPGMSSRRRIQNDSSTANSNKDSRKDDRETTLATTRSGTPSPLISRTKSPASTGRPTRMTRNLTEVNEGRGSRKRLETDDSDSSDSDGSDSPVIPIKPRRRNCETREARKRAESRMKVDENSDIDEDKEIEEPRRGRRSRRTLAKITEIKSEPESETEQPKGCEFDLNQIRSELKGFDKAVKIEMSSTSTSQEQEEDEEEKKSNIIKQEKSELDEKKASLDNDSKISDKQEISTLPIKQDVVNTEAVPESTEDIYEFKEPEPFEFEVRNKRDSSGSDKPEKDSNKDLKDKSTAASPASIVKKRPVEDELKSPKKRLKTSVTSSQSPAAAATTKDSKPDINRSATPVETIVPADAKKKTTRKIFNKSDDTESTEGEESLSLTSLSPTKFYPSTSYPGATVIRRHKISTEEEIGSSHHETSTESTKNKRLLLNKTTPIKAPADHKSEEQIGDETKKKSIKPKALDLDKGNKETKEIPSFYIPAKVIETREEEQKPSVKKKTKTQDPSTVLETKKKQAVVRQPPTRKDRRSSEESDSSSDIESISTRDPSKYFSQYSGPKTKAAAAIASEYESLNNKVDAQSGEKRTEPVQSIEKSQSNATATVTKSSSVEQKSEHTMSSAPAPLTVPPPISARLPATATIEEKLSAAAVFHRRQMIESKKEEESKQDRKVAKEIPKKTHGVSFNATKKVEAKLTPEPEKKKVEAPLIIPIKDPLQEIEIRTDPLLEIMKSKEEELLKAKKSIEEQKPPINVIKTYQRKEPPSKPEESWKKVTSTTVISDQLAAVTSTGRKEPFVSRIKPLERSESVDSTDSSDSERRLTIIDEDYTDEAGPEQSKKSSHSEQSSSVTTNAQRDLQADIINTMMQTKLVTKMDEDGENINSLLCEEEIPGSPTPGADSHHEHQERSTSSSSQNVFKSDLGSKAAVAFVAAQLPLTIPSTTSVSTLVSSSLESLNAGNGKSITSIASNSPVSVLTTTSTSHLYVTTVVTTTTGSAPSPTHSHSNQRRDSNVEPMEVDVAPVALDFNNSSITIQRVPTPSLSLDSDSKKDSMEVDNDALSKSDNPSTSTENVSEDTKIKGAMKRTSSITSADEVENVSPKKRAKRTGVQQTSLSGSVKKSPRQNSKNRRSTTRSDTDDSDEEQATPQVPRYIRGVLTNTTVVPPRKLPEPTNYNKSPRKYSPEFDSNARIAYLNKQLSGTIKEYNEYKTVNIKVDRIRRKLKKKKSREGPKSKDDSEQSAPTQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01483621;
90% Identity
iTF_01483621;
80% Identity
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