Tpre005443.1
Basic Information
- Insect
- Trichogramma pretiosum
- Gene Symbol
- ATFC
- Assembly
- GCA_000599845.3
- Location
- NW:2541705-2556923[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.8 5.8e+03 -3.1 0.6 40 56 166 184 161 192 0.54 2 2 8.2e-13 5.4e-10 38.6 12.3 2 63 413 474 412 476 0.96
Sequence Information
- Coding Sequence
- ATGTCGTCAACATCATCAATGATATCGAGTCAGGAAGAAATGATGATGTGGAAGGAAGAACCACTGTCCCCTAGTGGGACAGCACCACTAGATTTAACAGCCGAATGGTTTTACTCTGATGAGAAACCATTAGAATTAGAAGGGTTTTATGAAGATGCCGTGTGCTGCAATTCACCCCTTACTCGTGCACAGATCGCTTCAAAATGGTTAGAAGAGTTAGATTCAGCAGAATGGATAAAAGAAGAAGaatcaCTCAACGACTGGCTCGAGAAAAAGATAGACCTGCCGATTTTCTCCGATATTATAACACCGGAATGCGTACCAAATCGATCGGCTGTGGTTTACCCCAACATCCAAAAACCACAGCCCCAGATAATACCGCAAGTAGCGCCTCAGTACCTGATTGTTGAACAACCGCAGCAtgtgccgcagcagcaactgcaacACCATCAGCACCAGATTCAACACCATCAATTCCACCaccaacagcaacagcagcagcaacaattaATGCAAATTGACGAAACTCAGTCTTTGCTACGCGAATTTGAGACTGTTCTCGGCGATGTCGAGGCTTGCCACCAAATTCAATACAGCCCTTCGGCTTTGACACCACCGCAATCGCCGCCGCCCAAGATCCAGCAAAAATTACTCGTCACTCTACAGCCGTTGCAACACGAACAGCAGGTTCCCACCTTCAACTCTTTctatcagcagcaacagcaacagcaaccgAGACTAACGgAATCAACCATTCTAAACGCACCAGTTCAGCACCAACAGTCTCAGTTGCACCAACAATTCAACATCAATTCCTTGCCACTGAACAACAGTTCGACTGTACAGCACTCGTTGGCTGCCGGTCAAATAGGTGGACAATGGGCTGCAGGGAATCTGTCGTTGGACTCTTTGAGCCAAGCAAGTACCGATGTCGCGTCGGTTGACGAGGAACTGGCTAAAGTCGACGAGTACGTGCTCAGCTGTGTCGAAGATGCGATTGGAGGAAGCAGTGGAAACTCGGCTGCTTCGTGCACATCGTCTTCGTCCCCGGCTTCGCCTTGCACCAGTTCCAATGGTAGTTGCATGTCATCCGAGGATTCGAATGACGATCCAGAGTGGTCGCTCGAATCTGCTGCTAATGATCAAGCTGCTGCATCAGCTGTTCGCGGCAAGCCCGCTCGCGGTGCTGGGCGTAAACCTCGCGCCAGCAATAAACCCTACTCGCGCCCCAATGCTGAGGACAAGCGCTCTCgcaaaaaagaacaaaacaaGAACGCTGCAACGCGTTACCgtcaaaaaaagaagcaggAAATCAAGATGATAATCGGCGAGGAGCAGGAGTTagtcaataaaaatgaaaagcttAAAGAGAACGTTAAAGATCTGGAACGAGAAATCGGTTACTTGAAAAAGCTCATGCGCGATTTGTTCAAGGCCAAAGGCATGATCAAATAG
- Protein Sequence
- MSSTSSMISSQEEMMMWKEEPLSPSGTAPLDLTAEWFYSDEKPLELEGFYEDAVCCNSPLTRAQIASKWLEELDSAEWIKEEESLNDWLEKKIDLPIFSDIITPECVPNRSAVVYPNIQKPQPQIIPQVAPQYLIVEQPQHVPQQQLQHHQHQIQHHQFHHQQQQQQQQLMQIDETQSLLREFETVLGDVEACHQIQYSPSALTPPQSPPPKIQQKLLVTLQPLQHEQQVPTFNSFYQQQQQQQPRLTESTILNAPVQHQQSQLHQQFNINSLPLNNSSTVQHSLAAGQIGGQWAAGNLSLDSLSQASTDVASVDEELAKVDEYVLSCVEDAIGGSSGNSAASCTSSSSPASPCTSSNGSCMSSEDSNDDPEWSLESAANDQAAASAVRGKPARGAGRKPRASNKPYSRPNAEDKRSRKKEQNKNAATRYRQKKKQEIKMIIGEEQELVNKNEKLKENVKDLEREIGYLKKLMRDLFKAKGMIK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483589; iTF_01482154; iTF_01481398;
- 90% Identity
- iTF_01483589; iTF_01482154; iTF_01481398;
- 80% Identity
- -