Basic Information

Transcription Factor Domain

TF Family: zf-C2HC
Domain: zf-C2HC domain
PFAM: PF01530
TF Group: Zinc-Coordinating Group
Description: This is a DNA binding zinc finger domain.
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 4 0.088 4.2e+02 1.2 0.1 23 29 1 7 1 7 0.86

2 4 2.4e-19 1.2e-15 57.4 8.3 1 29 20 48 20 48 0.98

3 4 0.021 99 3.2 0.2 22 29 65 72 63 72 0.89

4 4 1.1e-19 5.2e-16 58.5 5.1 1 29 105 133 105 133 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	4	0.088	4.2e+02	1.2	0.1	23	29	1	7	1	7	0.86
2	4	2.4e-19	1.2e-15	57.4	8.3	1	29	20	48	20	48	0.98
3	4	0.021	99	3.2	0.2	22	29	65	72	63	72	0.89
4	4	1.1e-19	5.2e-16	58.5	5.1	1	29	105	133	105	133	0.97

Coding Sequence: cTTTCCGGTTGTCCACGATCCGATCGTTCCCAAATCCAAGCACATTCACAAGAGCTGAAATGTCCAACTCCAGGCTGTGACGGCTCGGGGCACGTAACTGGCAACTATTCGTCCCATCGAAGCCTATCAGGCTGCCCTAGAGCCAATAAGCCCAAGAGCAAACCACGAGATGGTCAGGATTCCGAACCATTGAGCGCTTCTGGCTGCCCCATAGCAAATCGCAACAAGATGAGGGTCCTCGAGTCCGGCGGCACTGTGGAGCAGCATAAAGCCGCAGTAGCTGCGGCCACTGCCATGAAATTCGAAGGTGTCAATTGCCCAACGCCAGGTTGTGATGGCATAGGTCACATCAATGGATCTTTTTCCACGCATAGATCACTCTCCGGTTGCCCGATTGCAGGTCACTCAGTCAAGAAACCCAAATTTGAAGATATGTCGGCCATGTATAGCAAGGGCATTACaggtATCGAGACAAGCTGCCTCAACGGTCCAGCAGTACCATCTAATGCCTGTCTAGCGACTCTTGGGCCTTCCCCAGCGTCGGGCAATAATGCTATGGTAACGACAACGCCAACGCCTGGAAATGCAACTGGTGGCGAGGATCTCTACACACTGGAAGCCGAGATTTCTGAGCTGCAGCGCGAAAATGCACGGGTCGAATCTCAGGTTTTGCGACTGCGCTCCGACATCACAGCTATGGAGAATCAACTAAAACACGGCGAGAAGGACAACTCCTCACTCCAGCAGCGTAATAACAATCTAACGGATTATTATCAATCTCTGCGCGATAACATGATCACACTGCTAGAACACGTGCGTATACCAAATTCGGCTGGAACAGGTAGCCATGCAACTGCAGGAATTACCAATGCTGCTCCTGAAAAGATACTGGGACACCACGAGAACCTCGACAGTTACCTGACTAAGCTGCAGACGCTGTGCACGAGCGCGGATGGTTACTGTGGCGCCTCAGCGAACGACGAGCCACTGCACCATCAGCGGCCGATGTACGATACCGTCAAGACTGCTCTGCAAGATTTCACGGTGCTGCCGACACCCATCTGA
Protein Sequence: LSGCPRSDRSQIQAHSQELKCPTPGCDGSGHVTGNYSSHRSLSGCPRANKPKSKPRDGQDSEPLSASGCPIANRNKMRVLESGGTVEQHKAAVAAATAMKFEGVNCPTPGCDGIGHINGSFSTHRSLSGCPIAGHSVKKPKFEDMSAMYSKGITGIETSCLNGPAVPSNACLATLGPSPASGNNAMVTTTPTPGNATGGEDLYTLEAEISELQRENARVESQVLRLRSDITAMENQLKHGEKDNSSLQQRNNNLTDYYQSLRDNMITLLEHVRIPNSAGTGSHATAGITNAAPEKILGHHENLDSYLTKLQTLCTSADGYCGASANDEPLHHQRPMYDTVKTALQDFTVLPTPI

Sequence clustering based on sequence similarity using MMseqs2