Basic Information

Insect: Trichogramma evanescens
Gene Symbol: mecom-b
Assembly: GCA_902732785.1
Location: CACVKI010146128.1:59903-87693[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0036 0.3 11.7 0.2 2 23 348 370 347 370 0.96

2 8 0.047 4 8.2 8.7 1 23 406 434 406 435 0.86

3 8 1.8e-05 0.0015 19.0 2.1 1 23 441 463 441 463 0.95

4 8 4.4e-06 0.00037 20.9 4.5 1 23 469 491 469 491 0.98

5 8 0.002 0.17 12.5 1.4 2 20 499 517 498 518 0.93

6 8 3e-08 2.6e-06 27.7 1.7 1 23 965 987 965 987 0.99

7 8 6.4e-06 0.00054 20.4 3.5 1 23 993 1016 993 1017 0.97

8 8 0.00013 0.011 16.2 5.0 1 23 1022 1044 1022 1044 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0036	0.3	11.7	0.2	2	23	348	370	347	370	0.96
2	8	0.047	4	8.2	8.7	1	23	406	434	406	435	0.86
3	8	1.8e-05	0.0015	19.0	2.1	1	23	441	463	441	463	0.95
4	8	4.4e-06	0.00037	20.9	4.5	1	23	469	491	469	491	0.98
5	8	0.002	0.17	12.5	1.4	2	20	499	517	498	518	0.93
6	8	3e-08	2.6e-06	27.7	1.7	1	23	965	987	965	987	0.99
7	8	6.4e-06	0.00054	20.4	3.5	1	23	993	1016	993	1017	0.97
8	8	0.00013	0.011	16.2	5.0	1	23	1022	1044	1022	1044	0.98

Sequence Information

Coding Sequence: ATGAGCGACGATAACGCCGAGTGTCTGGATCTGTCCAGCGCGACGCTGGATTACAAGAGCTGCGGAAGCAGCGACGAGGGCGAGCCAGCTAGTGGCGGAGCGAGGAGCGTCGGGGGTGGCTGCGAGAGCGGCGAAATGGAGGAGAACGGCTCGTTGCGCTCGTTGAGCTCGGCCTCGAGCAGCGTAGGAGGAGGTGGTGGCAGTGGCGGCGTTGGCGGTGGTATCGACGTCGGCGCCGGGGCCGGCGACAGCCTCAGCCAGTCGTCGGCCAGCGCCGCCGCTTTTCAACAGCAActacagcagcatcagcgaaACCAACTCGGCGACTACAGCAGGCTCATACCGAGCAACGTGCTCGAGAACGTGCTCGGCAACGCGCGACTGACCAACCTCGACTGTTTCAATCTGCTCATGAACGAACTGAAGCAGCGCACCTCGATGGACGGGAACGCGATCCTTCCCGAGGATCACGATGCCCGCCAGCTGACCAGATATCTGCTCGGCCTGTCGCACGAAAAGTTTCAACAAGTTGCAAAGGAAATGGTGAGTCAGGAGATGCTGCCGAAGGCCATCGAGCTGAGACTCTCGTCCGCGGGCCGACCTTTCGTGCGAGCTCGCAAAGACATCAGACCCGGCGAAATTATCGAATTGCCCAGATGCAACAGCGGCAACATCTGGTGGAGCACCAATCCCAAATTCGACgAGACTTATTACGGAGTGGTGGTGAAAAAGGATTGGTTCAGGTTCGTTCCCGTCGTATGCAATAAAAATGAGGCGAACGTGGAAAAACTTCATAATCAAGATGGATGGGGATATTATTTGGCGAAGAAAACGATATATGCCGGCGAAGAGCTGATCTCGTACGTGGCGCCGGGACAAGAGCAagaacaacagcagcaacaacagcagcgacagcgtcagcaacagcaacagcaacggcTGACCGAGGACGAAAACACCAGCGAGTTCGCGTCTCAACATAGTGGTACGTCGCATGCGGATGATGATCGTTATGACGATTTAGAGTTACCAGTTGTCATAAAGTGTGCCGTGTGTAACAAGTCATTCTTCGACATCGAGGtACTCAACAGCCATCTCATCACGAAGCATCGATACCCCTCGGGCGTGCACAACTGCAAGAGCTGTCCGGCCGCGTACGCctggctgccgctgctcgttCGCCACCGAGTCGTCGCCCACGGCGACGTGCGCAAGTACTGCTGCGAGAACTGCACCAAGCCGTGTGACTCGCCGCAGGTCTTCACCGACGCCTCGAATCTCCAGCGCCACATCAGGAGCCACCACGTGGGCGCCCGCAGCCACGCCTGCTCGCAGTGCGGCAAGACCTTCGCCACGAGCTCGGGCCTGAAGCAGCACGCCCACATACACAGCAGCGTCAAGCCGTTCATCTGTCCGGTCTGCAAGAAGTCCTACACGCAGTTCTCGAATCTCTGCCGGCACAAGCGCATGCACACCAAGTGCCAGACCCCGATAGTCTGCGACAAGTGCAACGCCACCTTCCAGACGACCTCGCACCTCACCAAGCACAAGAAGTGCTGCGGCACCTTCCCCTCGCTGCAGTcgccccagcagcagcagcaccagcagcaccaccaaCAGTCGGGTCAGCTTCCTCCgtcggcgcagcagcagcccaccGGGGTGGCGCCGCTGCCGCAGCCACCGAGCGACACCAACATGCAGACCAATCCCTTCCTCTATCCAGGACAGTCGCTCTTCCCGCACTTCTATCCGTCTGATTTCATGAACTATCAATCGAGCAGCTTGTTGCGCGACTACTCCTTGCACTGCTTTACACCCAAGATCGACGGTTTACTGTCGGCGACGATGGACAGACGATTTTTGGAAACGACTCAGCAGCCGCTCAAGCTCGAACCGAAACGGGAGGACGATCCTCGACAGCAGGACAGTCAGACGCCGCCGCGAATGATGCCGCCAACCAGTCAGGAGCTGCAGGTCTCCAGCAAAGTGTCGCCCAGCGCCGCGGAAGAGGCGACCTCGAGCTTGAGACCGTCGCCCGCGAGACCACCGGCGTCCCAGACCGAGCGCGAGCACGAGCGTTCGCGTAGCccggaagaggaggaggaggagccAAGAATAAAGGCTGAAATAAAGGCCGAAGTCAAGGCCGAAGTGAAAAATGAATCGTCCGATTCGCTGACGGAGCTACCGTTGGATCTCAGCGTGTCCAAAAAACACCAacacgaagacgacgacgaagataaAGAATACGAGGCTAAAGACGTAGTTAAGAGACGAAGAACTAGCTTCGAATCCGAGGTAGAAGAACGACGCAGCGATGCAAAGTCGGCGTCGCCCCAACCGACCACGACGACCAAGGTCGATCCGGAGTCGCCGATAGCTAAATCTAGATCGTCGCGAGAAAAGACACTGTCTCCCGATATCAAAAATACCCCTgtacatagcagcagcagcccgctACGGCCGAGCCAAGATAGGACGCTGACTCCGCCCACGCTGTCGCATCACGAGGCAGCGCTGGCGCCGCACATGGTCTATCCGAAACCCGTGCACCACCCACTGTTCCTCGAAAACATGTACCGTAACCAGTCGGTGAGTCAGTTTCCCAATTTCTCAGCGGCGACGAATCCTCTGCAGACCATGCAGGCGTACGGTCGTGGCTTGCCTTTTCTAGGTCCCTTCGGCAATGGCTTCGGCGCGCCGCCGAGGCCCAATTACTCCGCCGTGCTGCAGAGAGCGCCGACGGCCGCCTCGGCTTACGGCTCGTTCGCTGCCGACGCGATGATGGCCGCGGCCGCGGCCCGCCAccagccgcagcagcatcatcatcagcagccgCCGCCCGCCCTCTTCTCGAACGCCGTGACGCAGAACCGAGTGCGCGACAGATACTCGTGCAAGTTCTGCGGCAAGAATTTCCCGCGCTCGGCCAATTTGACGCGGCACCTGCGCACCCACACGGGCGAGCAGCCCTACAAGTGCAAATTCTGCGAGCGCAGCTTCAGCATCTCGAGCAATCTGCAGCGCCACGTGCGAAACATACATCACAAGGAGCGGCCCTTCGAGTGCCAGACGTGCAAGCGATGCTTCGGCCAGCAGACGAATCTCGACCGGCATCTCAAGAAGCACGAGGCCGAGGACGGCACGATGGTGGCGTCGGTGGCCGACTCGGCCGAGAGCAGCAACGAGAACGAGCGCGAGGAGGCCGCCTACTTCGACGAGATACGCTCGTTCATGGGCAAAGTCACCtacaacggcggcggcggcggcgggggaGCTCGCAACGAGCCCTACGACTTCACTCCGCCGCACCAGCAGGCGGCCCACATACCCGGCGCCAACGCGAGCTACGAAGCCGCTGCCGCGGTGTCGTCCAAAATCGCTGACAGCAGCATCGTCCACGACGACAGCAGCGAGGATGCCCTGTCGCCCGAGGCCACCTCGCCACAGCGCTTCGATCTGCAGATCGAGGGCAAGCGAGAACTGTTGAACAACAACATGGTTGAGCCGGTTCTCGGCGTGTCCTCATAG
Protein Sequence: MSDDNAECLDLSSATLDYKSCGSSDEGEPASGGARSVGGGCESGEMEENGSLRSLSSASSSVGGGGGSGGVGGGIDVGAGAGDSLSQSSASAAAFQQQLQQHQRNQLGDYSRLIPSNVLENVLGNARLTNLDCFNLLMNELKQRTSMDGNAILPEDHDARQLTRYLLGLSHEKFQQVAKEMVSQEMLPKAIELRLSSAGRPFVRARKDIRPGEIIELPRCNSGNIWWSTNPKFDETYYGVVVKKDWFRFVPVVCNKNEANVEKLHNQDGWGYYLAKKTIYAGEELISYVAPGQEQEQQQQQQQRQRQQQQQQRLTEDENTSEFASQHSGTSHADDDRYDDLELPVVIKCAVCNKSFFDIEVLNSHLITKHRYPSGVHNCKSCPAAYAWLPLLVRHRVVAHGDVRKYCCENCTKPCDSPQVFTDASNLQRHIRSHHVGARSHACSQCGKTFATSSGLKQHAHIHSSVKPFICPVCKKSYTQFSNLCRHKRMHTKCQTPIVCDKCNATFQTTSHLTKHKKCCGTFPSLQSPQQQQHQQHHQQSGQLPPSAQQQPTGVAPLPQPPSDTNMQTNPFLYPGQSLFPHFYPSDFMNYQSSSLLRDYSLHCFTPKIDGLLSATMDRRFLETTQQPLKLEPKREDDPRQQDSQTPPRMMPPTSQELQVSSKVSPSAAEEATSSLRPSPARPPASQTEREHERSRSPEEEEEEPRIKAEIKAEVKAEVKNESSDSLTELPLDLSVSKKHQHEDDDEDKEYEAKDVVKRRRTSFESEVEERRSDAKSASPQPTTTTKVDPESPIAKSRSSREKTLSPDIKNTPVHSSSSPLRPSQDRTLTPPTLSHHEAALAPHMVYPKPVHHPLFLENMYRNQSVSQFPNFSAATNPLQTMQAYGRGLPFLGPFGNGFGAPPRPNYSAVLQRAPTAASAYGSFAADAMMAAAAARHQPQQHHHQQPPPALFSNAVTQNRVRDRYSCKFCGKNFPRSANLTRHLRTHTGEQPYKCKFCERSFSISSNLQRHVRNIHHKERPFECQTCKRCFGQQTNLDRHLKKHEAEDGTMVASVADSAESSNENEREEAAYFDEIRSFMGKVTYNGGGGGGGARNEPYDFTPPHQQAAHIPGANASYEAAAAVSSKIADSSIVHDDSSEDALSPEATSPQRFDLQIEGKRELLNNNMVEPVLGVSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01485560;
90% Identity: iTF_01485560;
80% Identity: -