Teva005029.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Trichogramma evanescens
Gene Symbol
-
Assembly
GCA_902732785.1
Location
CACVKI010145732.1:125531-129218[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 12 0.074 6.2 7.6 2.3 6 22 258 274 253 277 0.84
2 12 2.3e-05 0.0019 18.6 5.7 1 23 365 388 365 388 0.98
3 12 1e-05 0.00084 19.8 0.3 1 23 394 417 394 417 0.94
4 12 0.11 9 7.1 1.3 2 23 427 449 426 449 0.93
5 12 4.6e-06 0.00039 20.8 4.6 1 23 455 477 455 477 0.98
6 12 1.6e-06 0.00014 22.3 0.4 1 23 483 505 483 505 0.98
7 12 0.014 1.2 9.9 6.7 1 23 511 533 511 533 0.96
8 12 1.6e-08 1.4e-06 28.5 1.2 1 23 539 561 539 561 0.99
9 12 0.00066 0.055 14.0 6.9 1 23 567 589 567 589 0.98
10 12 0.00094 0.079 13.6 2.1 2 23 596 617 595 617 0.97
11 12 2.5e-06 0.00021 21.7 2.4 1 23 623 645 623 645 0.99
12 12 6.6e-07 5.5e-05 23.5 2.1 1 23 651 673 651 673 0.98

Sequence Information

Coding Sequence
ATGATGGAGCCCTGCTTGTATGATTCGTCAATTTGTCGATTATGTGCAGAGGACAATGAAAATGGAGAATTATTGTTTCGTAATGACTCTGAAGAGAACGATTTGAGCGCTATGGTCAATCGTTATTTACCCGTTAAAGTccacgatgataaaaaatttcctcgaACAATTTGTCCAGGCTGCAATATTCAATTGGAATCAACGgctcaattttttgaattacttaTAAGAGGTCAAGAGAAATTGCAAGCTATATGGGAAAAACAAATTCAGATAGATCATAAATATGTTAATGATCACAatgttaaatattatattaaaattgcggaaatgaaacaaaaaaattctgtaattGAACTAAAGGAAAACAATTTGAATGAATCTTCAACTGAacacaaatataaacaaacaaaaaggaaatgcaagaaatcaaaaatttggAATAATGCAGAggaaaagtTGAGGGAGCCACAATACCAAGAAACTGTTGAAAAAGGAGATGAATTTAATGCAAATATCAATGAAGATAAAAGAGTCAGAAGGCATAGAAAAACTCCCAAAAGATTTGTGGAAAGCTTACGAGGAAAAGAAttagataatatttttcaaaataaaaaagtttcacatAAGAATATTCAGATTGaatataaatctaaaaattatattaaatctATAAAACAACAAGATAtcttattactaaaaaaaaaccaaacatCAGATACAACTCAAAAATTGGAATTaaagaatgaaaattcatttttatgtttgCCCTGTAATAAGATTTTCAATACTTTGGAAGATTTGATGCATCATCAACAATTGTGTTCCCATGGGAGTGAAGAATGttctgaaataaatttaaatcatgaaaaagaaaaaagttctcaaaaaaatatcaatttcatGAATTCAGATAAAGATAACAGCTCTTCTGTAGTAACTGTTTCTCaagatgaagaaaatattacatatattttaccagataatgattatttattaaaagataTTGATAGTGAATTTTCTGATGAAAGGCTTGatgaagtaaaagaaaaacacgAAAAGCTGAGTGCCTTagatgatgaaaatatttcatatcgatgtaaaaagtgtaaaaaacattttcaaacaagtttcaatttaaaaaaccacataaaaattgttcacttGGGTAAAAAACCATTTGTTTGTGAAATATGCAACAAAGCATTTTCTTATCAATCTAGTTTGAATGGGCATAAAGAAATCAATCATCAGataaaattaacaaatgatGGATGTGCTTGTTACGATTGTGATCAAATTTTAAACGATTCGAATGCACTTTTACATCACAAGTTAATGGAACATTGTAATCATAAACGTTACTCGtgtcaaaaatgtgaaaaaagttttaaacacAAACAACTCTTACAAAGACATCAGCTAGTACATTCAGAAGACAGACCATATCCATGTGAAATATGTACTGCTTCTTTCAAAACCaaagcaaatttattaaacCATCAATCAACTCATACAGGAGAAAAAAGATTTGCTTGCCATTGTTGTGATCAAAAATTTGCTCATAAAACTAGTCTTACTTTACATTTAAGAGTTCACACTGGTGAAAAACCATATAAATGCGATCAATGCACTAAAAGTTTTTCTCAAAATGGAAATTTGCAAGAGCATATGAGAATTCATACTGGAGAAAAACCGTATTGTTGTGAATTTTGCAAGCGAAGATTTACAACATCTTCGCAATATAAATTACATGTAAAACGTCATACTGGGGAGCGACCTTGGGTGTGTGAAAGTtgtggaaaaacatttttgcataaaGATACTTGGAAAACCCATTTGCGTAGGCATACCGGAGAACGCCCCTTTCAATGTACTGAATGCAATAGAAGATTTACTGAACAGTGggctttaaaaaaacatacgcGACGTCACACAGGAGAAAAACCTTACAAATGTGATGTATGTGGAAAAGAATTTGCAGATTGTTCAAATCTAAGCAAACATAAGAAAATTCATAGAGTTCGTGAATCAAATGAAGTGGAAAAATCTAAGGGGAATATTTGGCAAAGGTTGAGAAATGgtcaagaaaatattaattttgttaatgtcaaTGAGTCTCAAGAAAACATAACAaccgaaaatgaaatttctcaaataatttatgtagcttataaaaattctaaacaATCCATTCCTGGCAAAACTAGCACCACAGTGAATTCCAAATCAGACCTAAGTAATAATGAATTATTGAATGAACAGTTCAACGCGGAATCATTTAATTCACTGCTACAgGTAACAGATGAAGATGGAAACACCATTCCTCTATCCATTGAACAGGCAAGACAATTATTTTCTGAAGGACAAGTTGTAGATCAATTGAATGGAAACCAAATCATTCGAGTTCAACAGTCGAACTCTTTAGAAATTGATGAAATCTCTACTACTATTGTACCATTGAAAAGTAACACTTCATCATCCTCAGTATCAAATATACAACCAGATGCTGAAAATATTGAGCGAATCTTAGAGGATAAGAACACCATTAACACGGGAGTCGCACAGATAAATCAAATTGATGCTGGAAATCAGATACAACTGGATGGTAATCAACAAGCCATTGTTTTTGAAATACAAGATGGACAAAAAGTACAGATTATAAATGCATCATACCCCTTACAATTAACACCAGAGTACCTGAatatgatataa
Protein Sequence
MMEPCLYDSSICRLCAEDNENGELLFRNDSEENDLSAMVNRYLPVKVHDDKKFPRTICPGCNIQLESTAQFFELLIRGQEKLQAIWEKQIQIDHKYVNDHNVKYYIKIAEMKQKNSVIELKENNLNESSTEHKYKQTKRKCKKSKIWNNAEEKLREPQYQETVEKGDEFNANINEDKRVRRHRKTPKRFVESLRGKELDNIFQNKKVSHKNIQIEYKSKNYIKSIKQQDILLLKKNQTSDTTQKLELKNENSFLCLPCNKIFNTLEDLMHHQQLCSHGSEECSEINLNHEKEKSSQKNINFMNSDKDNSSSVVTVSQDEENITYILPDNDYLLKDIDSEFSDERLDEVKEKHEKLSALDDENISYRCKKCKKHFQTSFNLKNHIKIVHLGKKPFVCEICNKAFSYQSSLNGHKEINHQIKLTNDGCACYDCDQILNDSNALLHHKLMEHCNHKRYSCQKCEKSFKHKQLLQRHQLVHSEDRPYPCEICTASFKTKANLLNHQSTHTGEKRFACHCCDQKFAHKTSLTLHLRVHTGEKPYKCDQCTKSFSQNGNLQEHMRIHTGEKPYCCEFCKRRFTTSSQYKLHVKRHTGERPWVCESCGKTFLHKDTWKTHLRRHTGERPFQCTECNRRFTEQWALKKHTRRHTGEKPYKCDVCGKEFADCSNLSKHKKIHRVRESNEVEKSKGNIWQRLRNGQENINFVNVNESQENITTENEISQIIYVAYKNSKQSIPGKTSTTVNSKSDLSNNELLNEQFNAESFNSLLQVTDEDGNTIPLSIEQARQLFSEGQVVDQLNGNQIIRVQQSNSLEIDEISTTIVPLKSNTSSSSVSNIQPDAENIERILEDKNTINTGVAQINQIDAGNQIQLDGNQQAIVFEIQDGQKVQIINASYPLQLTPEYLNMI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01485323; iTF_01482974;
90% Identity
iTF_01485323;
80% Identity
-