Teva001080.1
Basic Information
- Insect
- Trichogramma evanescens
- Gene Symbol
- -
- Assembly
- GCA_902732785.1
- Location
- CACVKI010145625.1:52195-54237[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 0.016 13 6.0 0.3 18 43 73 95 68 96 0.91 2 8 4.2e-05 0.035 14.2 2.6 14 44 126 153 119 153 0.89 3 8 0.00015 0.12 12.5 0.9 10 44 180 210 177 210 0.90 4 8 0.0022 1.9 8.7 0.1 14 40 249 272 243 276 0.86 5 8 4.1 3.4e+03 -1.7 0.3 35 44 323 332 318 332 0.86 6 8 0.013 11 6.2 1.8 17 43 374 397 366 398 0.87 7 8 0.00099 0.83 9.8 1.7 3 44 389 426 387 426 0.88 8 8 4.1 3.4e+03 -1.7 0.8 19 29 433 443 431 448 0.76
Sequence Information
- Coding Sequence
- ATGGAAATTTGTAAAGTTAAAACTGAAATTTGTGAGCCTGAGTTTGTTGCAGTAAAAATGGAATGTGACATGGACGgctataatgaaaatgaaactgATTGTTTGAATAATGATAGCCTTCAAAGTGCAGATGAACATTTAAGAAATGAGATAAATGTGATTGATTCATTAGCAATTGATGAACCACAACAACAAGTTCATGGAAAAAGTTTGCTACAATGTGATCAATGTAACAAACTATTTGATAGAAAATATAACTTAAGGCGACATGTTACTCAGGTTCATGAACCTAAAAAAGTGGATGTAAGAGTGATAACTGAAAATAAcatgattaattttataataattaaagaacctcaacataaaattgatgaaaaaagagtAGTTCAGTGCGATCAGTGTAAcaaactatttaaaaataaatcttgcTTAAGGCGTCATGTCAGAGAAGTTCATAGAAGTGAAAAACCagttaaaagtataataacaGATGATAATGCGATTAattctataattattaatagtgCACTACGTAAAGCTCCTAGAAGAACTGTGTTACAATGCAATCAATGTAACAAGTTATTTGATAGAAACTATAATTTTAGACGACATATTGCCACGGTTCATAAGAGTAACGAACAAGATGAAAGCATAGTAACTAAGGAAGCAGATGGAAGTATAATAACTGAGGATAATGCAATGAATTCTATATCACTTAATAAATCACAAGATAATTTTGCTGAACAAAGTGTGTTAAAATGTGATCAATGTAACAAACTGTTTAATAGATCCTTTAATTTCAAGCGTCATATGCAAGTTCATAAAGCTAAAAAAGTGGATGAAAGTATAATAACTGAAGATAATGTAATCAAGTCTATAacaattaatgaaactcaAGATAAAGTTGATAAAGTAAGTGCATTACAATGCAATCAGCgtaaaaaactatttaaaagCAATTGCAGTTTAAGGAGACATGTCACAGAGGTTCATAaggataaaaaacaaaatgaaagtATAATAACTGAGAAAGCAGATGAAAGTATCATAACTGAAGATAATGCAATTAATTCTATAAGAATCCAAGAAGAGCAATACGAAGTGGATGAAAAAAGCTTGTTTGAGTGCAATCAATGTaacaaactttttcaaaacaacAATAGATTGAAGCGACATGTCACCCAGGTtcatgaaagtaaaaaagtagaatGTGAAGTTTGTCATgagttttttgcaaaaaagtcAAATCTATTAGTTCATTATGATTCAGTTCATCCTGGTTTTATGACACACTCCTGCAATGAATGTTCAAAGACATTTGATAAGAGAAAAAACTTgaataatgaaaaagaaaatactgCTGATAttagttaa
- Protein Sequence
- MEICKVKTEICEPEFVAVKMECDMDGYNENETDCLNNDSLQSADEHLRNEINVIDSLAIDEPQQQVHGKSLLQCDQCNKLFDRKYNLRRHVTQVHEPKKVDVRVITENNMINFIIIKEPQHKIDEKRVVQCDQCNKLFKNKSCLRRHVREVHRSEKPVKSIITDDNAINSIIINSALRKAPRRTVLQCNQCNKLFDRNYNFRRHIATVHKSNEQDESIVTKEADGSIITEDNAMNSISLNKSQDNFAEQSVLKCDQCNKLFNRSFNFKRHMQVHKAKKVDESIITEDNVIKSITINETQDKVDKVSALQCNQRKKLFKSNCSLRRHVTEVHKDKKQNESIITEKADESIITEDNAINSIRIQEEQYEVDEKSLFECNQCNKLFQNNNRLKRHVTQVHESKKVECEVCHEFFAKKSNLLVHYDSVHPGFMTHSCNECSKTFDKRKNLNNEKENTADIS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01484153;
- 90% Identity
- iTF_01484153;
- 80% Identity
- iTF_01484153;