Teva008427.1
Basic Information
- Insect
- Trichogramma evanescens
- Gene Symbol
- ttk
- Assembly
- GCA_902732785.1
- Location
- CACVKI010140217.1:42164-44374[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 2.6e-08 1e-05 25.2 0.0 1 37 235 271 235 278 0.91 2 4 2.4e-10 9.6e-08 31.7 0.0 3 43 287 326 285 328 0.92 3 4 0.015 6.2 6.7 0.0 19 33 353 367 341 372 0.81 4 4 1.2e-11 4.9e-09 35.8 0.3 4 43 399 438 397 440 0.91
Sequence Information
- Coding Sequence
- ATGTCAAAGCACACAATAGCCGAGCCCGGTGCCGATCCATCTGAGAATCAGATGTTTTGCTTCAAAGCGAAAGATGATTACGGGGATCGACTGGGCGACGTCATTAGAGAAGCGTACGAGCGAGAGTCCATGCTGGATGTGACATTGTGGGTCCAAGGGGAACAAATACGAGCCCATCGGGCCGTATTATATGGTTGCAGCGAACTTTTTAAGgaaatttttagTCAGACCTATGATGACGATACTGTACTTATAATTGATGATGTGTGTGCTGAAGATTTGAAGTCACTCATCCATTTCATGTATTATGGACAGGTTCAGATCGAAGAAAATTATGTTGATAGATTTTTGGATGCTTGtcatttcttgaaaattcgTGGATTCGCAGAAataTTAGGATTTGAATTTAGTGAATCAAGTGAAACTTCGAATGATGGAGATATTTGTCAATTTGATACCTCTAGTGAAGTAAACTTGACTGATACACAAATCTCAGATTCAAATACTAGTACTGAAATTCCTTTACCAAGTTTTTCTATAGAAAATTGTACATCAATTACTGATATTAAGAAATCTCCATCGATTGTTACTACTGAAAATGCCTCAAGTTTACCCGTTCAGCcagcaaaaagaagaaggtTGCCTGATTGTCCATTGGGAATTAAATTGACTAAACGGAAAAGTAGTCTTAAAAGAGAATACACTGATGATCAGTTAGAGGCAGCAATTGCTGATATTCGAGCAGGAAAATCATTGATAGAGACTGCTACTAAACATAATATACCAAGATCTACTTTGTACGTGAGAGCAAAAGTCTTAAATATACCTTTAGCTCCAACAAAAAATGACTACACATATGAAGATATGAGAGCTGCAGTCAAATTAGTTCTTGctgGATCAAGCTTACAACAATCTGCAGACTGTTATGGAATTCCAAAGACTGTATTATGGAGAAGAATTCAAAGAGAAGCGGGTTATAAAAAACGAAGAGACAAAAAAACATATCCAGAAGAATCTAGGAGGGCAGCTGTAAAAGCATTAGAGAAAGGCGAACCGCTGTGTAAAGTTTCACAAGAGTATCAaATACCAAAAACAACATTGTTCAGGGATAAAACCAAATTAATTGATCAAGGTAAATTACCATCAACGATGTATAAAAAGCGAAataaagtagaagaagaaaagaaaagttcaCGTTTAGAAAAGGCAGTAGCAGCTTGTAAAAACGGTACTATGTCACAAAGTGCTGCTTCTGCTAGATATCAAGTACCAAAAACTACCATTTGGAGAAGGCTTCAAAAATCTAAAACttctaaaacaaaaaaaggtggTACATGTGAAACCAACAACATAACTTTTGTTAAGAAGGGTGAAGACATCGatgacaattttgaaaattatttagatcAGACTGTTGAAAATATAGATGCTGCGTATACTTATGGgaatgaaaatcaaattgcTGGTGAATCTGTAATTGTCTTAACTCAAGAAGATGTAGAAAGTCTGAACATACCAAATCAAGAATCAGTAGTTTTTGTTGAACAAGATAACGTAGACACTAATTTTGTATCTTGTGGCCTACATTTAGATGATAGTTCTCAAAATGTGATAGAAATGAAATTTAGGATggacaattaa
- Protein Sequence
- MSKHTIAEPGADPSENQMFCFKAKDDYGDRLGDVIREAYERESMLDVTLWVQGEQIRAHRAVLYGCSELFKEIFSQTYDDDTVLIIDDVCAEDLKSLIHFMYYGQVQIEENYVDRFLDACHFLKIRGFAEILGFEFSESSETSNDGDICQFDTSSEVNLTDTQISDSNTSTEIPLPSFSIENCTSITDIKKSPSIVTTENASSLPVQPAKRRRLPDCPLGIKLTKRKSSLKREYTDDQLEAAIADIRAGKSLIETATKHNIPRSTLYVRAKVLNIPLAPTKNDYTYEDMRAAVKLVLAGSSLQQSADCYGIPKTVLWRRIQREAGYKKRRDKKTYPEESRRAAVKALEKGEPLCKVSQEYQIPKTTLFRDKTKLIDQGKLPSTMYKKRNKVEEEKKSSRLEKAVAACKNGTMSQSAASARYQVPKTTIWRRLQKSKTSKTKKGGTCETNNITFVKKGEDIDDNFENYLDQTVENIDAAYTYGNENQIAGESVIVLTQEDVESLNIPNQESVVFVEQDNVDTNFVSCGLHLDDSSQNVIEMKFRMDN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01484006;
- 90% Identity
- iTF_01484006;
- 80% Identity
- iTF_01484006;