Basic Information

Gene Symbol
Mblk-1_1
Assembly
GCA_902732785.1
Location
CACVKI010145003.1:32105-47007[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.7e-17 1.5e-14 53.5 0.1 1 45 485 530 485 530 0.96
2 2 6.7e-18 2.7e-15 55.9 0.0 1 43 947 990 947 992 0.94

Sequence Information

Coding Sequence
ATGTTTGAATGTAGTTGTATTACCATCACAGGTCTGGAGCGGGTCGCCGAGGAGTTGATGGGCCGTAGGAAATGGAAGCAATACTCGGACAATATCTACACCAACGACACCAACAATACAAGCTCCACGCCGGCGTCCGACGCggcccagcagcagctacagctcCTACAATTACAGCAGCTGGCACAGGTGCAGCAACAAGCAAAGCCAGCCGATTCGCCGAGTCAAACGCTGAAAGCAAACTTGGCCAATCAGTTGCAGACAACTACTATTCAGCAAAGGTCAACGGTAAGCGCGCTAACGGGAGGCGAGCCATCGCCTCTCTGCGCAGACGAAGTCGCGACGACGGGTGGCCCAGAGAACGGACGCTTGGCCGAGGTTGCCCGGGAAAACGGTGAAACGACAGGAGGCGGTGGTGGCAGCGGTACTGGCGACTCTCGACACAACAACGAGACGACCGGCCAGCACCTCGATCATCTTCTCTCCAACGAGCTTCGCGCCTCCGACGACGAGGATCAAATAAGGATCAAGCGCGAGAGACTCGACGACGAACAGAAAACGATACCTAGCCCGTTGGACAAGGATCCCAACGATTCGGAAGGGACCAAGataaaggaagaagccaactCAGAAACGACGGTCAAAGTAACGCACGGTCTACTGAGGGtgaagaaagaggaagagcTTCAAGAGACACCGGGCCCAGGTGGCGGCGCCATCGGCATCGTTTGTCCGGTAAGGCCGACCTCGACGCCTCTgcacaacaataataacagcagcaacagcaataacaacaacaacaacaacaacaacaacaacaacggtccctctgaacagctgcaagagcAACGTAGCGCCTCGACTCCGCCGAAAAAGGAATTGGTGACTTTTAACGCGGCGGCGTATGTGCTAGGCAGAAGGCCAAGTCCGCCACCAGAGGACTGGAAGCCGCTCGACAAGTGTTACTTCTGTCTCGATGGCAAGTTGCCGAACGAAGAGCAGCCACCTCTTAGTCCACGCAGCGAAAGTAGTCAAAGTTCGCGTTCGGCCGAGTCACCGATGTCTGTACAAGTGGATCCGATGGCGGCGTCGGTGGTGGCTGCCGCTCTCAGCGGTACCTACCCGACTCTGCTGCCCCAGTGGGTCTTGCGACACCAAGATGCGGCACAGATCGCCGCCGCAGCGGCGGCCGCAGCTGCGGCTGGTCACACCGAGAACTCGGGTGCCGATCAGCCACTCGATCTCTCCGCAAAGCCAAAAATTTCGgACAACAATATATCTATACTGGATCAGCAAAAAATACCTCTACGAATGGCCGCAGCTATCGATCCAAAAGCTATCTTTAACAGCACGTGCTACAGAGCGAAGCCAAGGGCGCAGGGTGGCGGTGCAGCGGGAGGCGGCAACGCGGTGCCCGTAGCGACAGGTGGTGGAGGTGGTCGGCGCACTTATACCGAGGACGAGCTGCAGGCGGCGCTGCGCGACATCCAGAGCGGCAAGCTCGGCACGAGGCGGGCCGCCGTGCTCTACGGCATCCCCAGGAGCACCCTGAGGAACAAGGTCTACAAGCTAGCGATGGAGCGCGAGAGGGACGCCACCCTCAACAATGCCacaagcaacaacaacaacacagcCACCACCCAGAACAATTCGAGCACGAACAACAACAGCACGACTCCGACGTCAcagaacaacaacaataacaacgaggtgacggcggcggtggtgctCGCTTCTAATAGCAATAACGGGCTCAAGCACAACAGCTGTGCCGACGTCATCGCCGCCGTCGCCACTGGCACTACCACCACCAACAACTCCACTATCACCACACCAAATACCAAACGACAAAATGCCACAACCGCGAACGCGCAACTGGACGAGGTGGACGATAAAGAGCTGTCCGGAgcagaggaagaaaaagaagtggAAAAGGCACTGTTGAAACCTCTGCTGTCACTCGAAGACCTCGTGCGCTTTTCGCATCTCGAAGGTGGCAGTGGTGAGTCACTCAGGGCTCTGCTACAGCGTGGTCAGACGGAGACTGGGCCTGGTGGAGCTACCAACGAGTGGTCAAGTTTCGAGCACGCTGGTATCGGACCCTATTTGCAAAAAATGCTCGCAGCTGCTGCGCCGTTTAAAGGAATGGATCCAGAAATTATGCGTCGTCTAATGAACGAGGATCAGAAGAAGATGAACGTCAACGGGGAACAGGTACAGCATCTTCATCACGCCTCGTTACAGCATCGTCTCACGGCTGGACAAAGAGGCCCGATGACGAACGACGACTTCAATCCAACGATCGAAGACGAGGCGAGCGACAGCGGTCAGGGTCGACCCATACTCAAAATTCCGTCCTACAAGCCGGCAAGTTCCGCCGGCTCGAGCAAGAACAACGTCGAGTCGGTGGCGGCCGCGGCGTTTGCCCAACAGTTCgcggcagccgcagcagccgcggtCGCGGCCAACGCGGTCGGGACAGCCAGTCCGGGACTGCTCGAGCGAGCCAGCCCCGCGTTCTCGGGCACGAGCTCGCCCACGAATTCGCTCATTGGCAAAGGCATGGCCGTAAACTTTCGCGACGTCATTGCTAAAAGCATAAGCAGCAAGTTCCAGGAGGGCCAGTCAGCGAGTTCCGGGCCCGCTGGCGCCGCTCAGTCGATGATCTCCGAGTCGAACCCCTATAAGCGGGGTCGGTTCACGCCACCGCACGGCCAGCCACAGGGCCAGCAGTCGAAGCAGTCGGCCGCGGCTCAGCAGGCCGCCCAGGACAAACAGAACAAAAATGCCTCGGGGGGCAAGGGCACGAGACCGAAACGCGGCAAGTACCGCAACTACGACCGAGACAGCCTCGTTGAGGCGGTCAGGGCTGTGCAAAGAGGCGAGATGAGCGTGCACAGGGCTGGTAGCTACTACGGCGTTCCACATTCCACGCTTGAATACAAAGTCAAGGAGCGGCATCTCATGAGACCGAGGAAAAGGGATCAAAAGCAGCCAGACGATAAAACGAAAGATGCACCGATGTCGTCAAGTGCGACGCTGCGTACGACGCCATCCGTATCGCCGGAGAAAAAACCAATGATAAAGTCACCACAAAGCAAGCCATTCGCACCAGCCAGTGGCGCGAACGCTGCTAGCGGGGTGCCAGGACCGAACGGCATGAAGATGCCATCCTTCATCGACGGCATGCCGCCCTTGCCGTTCGGCCATCCCTTCAACTTCTGGAGCCCGACGCCTTTCATGCCAGGCCCGACCGCTTTCATGTcgggcagcggcagcaacgtACCTGCTTTGATTCCGGAGCAGTACTTTGCGTCGCAGCGCATGCGAGGCTTGCAGGAGCAGCAACGAAACAGCGGTATgagccagcagcaacagcaacgggACGCAGCGGGCGCCACGGGGGCCTCGAGCGATCAAGAAGCTGCTGCGTCGAATGCGCGAACCAGCTCACTGATCAAGTCGCCGCGCGAAATGGCAGAGAGTCTGTACGAAGGAGGATCGGCGGTGAACGGCAGCTTCCTGGACAACCTCATCAGGTCGAGTCTGGAATCAGGCATGCCACGCGATAGGTCGCTGGCTGAGATTCGAGGTGGTAAttcgcagcaacagcagtccgAGCACCTGAGCACGTCGTCGACGGGCAGCAAGGTTCTCATTGACCAGCTCTGCTGGAACTCGAGGCCGAATCTGGTCAGGCCGATGCAGACCGACAGCTGCAGCGAGGACGAAGGTGGCAAACCCTCGAGGCCGGAACGCGTGCCTACCGTCGATTTGAGCTCGTCGCCGCGACATTGTACGGACGAGGGTAGCGATCGGGGGCTAGCCTCGCCGCCTACGCCTGTATCTCTGTCGAGGCTCAGCAGCTCGGCCAGGGATGATGAAAATTCCAGGGGTAGCCGGGAACGCGAGGTACAGAACGGAGGTGGCAGCGAAAAAGAGGACGAGCGCCCACATCGGGCCTCGAGTGACAACAGTAATAGCAACATCAGTAACTGCAACAgtagcggtggcggcggtggggGCAGCAAGAAGCTGAACCACTTTTCGGACATTACGACAACTGACAACAAGCTCATCTTCAAGAATGCCGTGTCAagcgacaacaaaaaaagtgcCTGTGATAGTAAGCTTATAGTAGATCATTCGAGCCAGCAAAAGACTCATCAGCATCAAGCCAAAAAGGATTTGGTGTTGGGAAGTAGCAACGGGCGTCCGGCCAACGCTCTCAACAGCGGCAGTAGTCCAGGTGACGAAGAgatcgacgacgaggaagagGATGACGATGGCGTTAGGTCGCCCTTACCTTTGCTGCATCATCATAACAGTCAAGAGCAAGTCTTGGTGGCTGCTTCGCCGAAGCCGCCTGTAGTCGTGGCCATGGAGAAGGCAGCCGTCGAGTAA
Protein Sequence
MFECSCITITGLERVAEELMGRRKWKQYSDNIYTNDTNNTSSTPASDAAQQQLQLLQLQQLAQVQQQAKPADSPSQTLKANLANQLQTTTIQQRSTVSALTGGEPSPLCADEVATTGGPENGRLAEVARENGETTGGGGGSGTGDSRHNNETTGQHLDHLLSNELRASDDEDQIRIKRERLDDEQKTIPSPLDKDPNDSEGTKIKEEANSETTVKVTHGLLRVKKEEELQETPGPGGGAIGIVCPVRPTSTPLHNNNNSSNSNNNNNNNNNNNNGPSEQLQEQRSASTPPKKELVTFNAAAYVLGRRPSPPPEDWKPLDKCYFCLDGKLPNEEQPPLSPRSESSQSSRSAESPMSVQVDPMAASVVAAALSGTYPTLLPQWVLRHQDAAQIAAAAAAAAAAGHTENSGADQPLDLSAKPKISDNNISILDQQKIPLRMAAAIDPKAIFNSTCYRAKPRAQGGGAAGGGNAVPVATGGGGGRRTYTEDELQAALRDIQSGKLGTRRAAVLYGIPRSTLRNKVYKLAMERERDATLNNATSNNNNTATTQNNSSTNNNSTTPTSQNNNNNNEVTAAVVLASNSNNGLKHNSCADVIAAVATGTTTTNNSTITTPNTKRQNATTANAQLDEVDDKELSGAEEEKEVEKALLKPLLSLEDLVRFSHLEGGSGESLRALLQRGQTETGPGGATNEWSSFEHAGIGPYLQKMLAAAAPFKGMDPEIMRRLMNEDQKKMNVNGEQVQHLHHASLQHRLTAGQRGPMTNDDFNPTIEDEASDSGQGRPILKIPSYKPASSAGSSKNNVESVAAAAFAQQFAAAAAAAVAANAVGTASPGLLERASPAFSGTSSPTNSLIGKGMAVNFRDVIAKSISSKFQEGQSASSGPAGAAQSMISESNPYKRGRFTPPHGQPQGQQSKQSAAAQQAAQDKQNKNASGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDQKQPDDKTKDAPMSSSATLRTTPSVSPEKKPMIKSPQSKPFAPASGANAASGVPGPNGMKMPSFIDGMPPLPFGHPFNFWSPTPFMPGPTAFMSGSGSNVPALIPEQYFASQRMRGLQEQQRNSGMSQQQQQRDAAGATGASSDQEAAASNARTSSLIKSPREMAESLYEGGSAVNGSFLDNLIRSSLESGMPRDRSLAEIRGGNSQQQQSEHLSTSSTGSKVLIDQLCWNSRPNLVRPMQTDSCSEDEGGKPSRPERVPTVDLSSSPRHCTDEGSDRGLASPPTPVSLSRLSSSARDDENSRGSREREVQNGGGSEKEDERPHRASSDNSNSNISNCNSSGGGGGGSKKLNHFSDITTTDNKLIFKNAVSSDNKKSACDSKLIVDHSSQQKTHQHQAKKDLVLGSSNGRPANALNSGSSPGDEEIDDEEEDDDGVRSPLPLLHHHNSQEQVLVAASPKPPVVVAMEKAAVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01482307; iTF_01484552;
90% Identity
iTF_01482307;
80% Identity
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