Teva011034.1
Basic Information
- Insect
- Trichogramma evanescens
- Gene Symbol
- ab
- Assembly
- GCA_902732785.1
- Location
- CACVKI010145068.1:204050-206946[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 6 2e-07 8.2e-05 22.3 0.0 9 38 338 366 338 372 0.86 2 6 3.6e-09 1.5e-06 27.9 0.0 9 38 401 429 398 434 0.85 3 6 5.6e-08 2.2e-05 24.1 0.0 9 38 466 494 464 499 0.91 4 6 4.6e-07 0.00018 21.2 0.0 9 38 530 558 530 563 0.87 5 6 3.4e-07 0.00013 21.6 0.1 9 37 597 624 597 629 0.90 6 6 1.5e-07 5.8e-05 22.8 0.1 9 37 671 698 671 703 0.90
Sequence Information
- Coding Sequence
- ATGTCGGAAAAAACGCAGCAACACCACCTGGTGCGACGCATCCAGCTCAAGGAGGACCCGTACTCCAAGGACGAAATCATGAAGCTGCTGCGCGAGAGCGAGCCCAACGCGACCCTGTGCTGCGAGTTCGGCGCGGTCGGCTGTCACAAGCCCATCCTGGCGGCGCGAAGCGCCCACCTCATGGAGCTCCTCAGACGCAATCCCTGCGCGCATCCGATCTTCTACGTGCCCGGGGCCAAGCACGACGAGCTCCAGGCCGTCGCGCACTTCATGTATCACGGCGAGGTCGACGTCGAGCTGTCGAAGCTGAGACACTTTTACAAGGCCGTCGAACCTCTGCAGATTCATGGCTTGCAATGGAAAAATACGAAAGAAAAATCTGAGGATAAGGTCAATTCAGATGATTATGATGATATCTATAGGATAACttgtgtttcaaaaaattccgAAAATGCAGATCTCAAGAAAGCACTCGTTGTCCTGTACGACAACGAAGAGATGATCGATATGACTCTGGCCTGTGACGATGGCTCCTTCAAATGCCATAAATCTGTTGTAACTGCATGTAGCGATTATGTGAAAAACGTTTTGTCTGATTCGATCAAAGATCCAGTTATCTTTCTTCTTGGTACCAAAGAACGAGAATTGGAAGCTATAATTGATTTGATGTACAATGGGAGAATCAAAGTAAGAAAATCTGATGTTCAAAGGGTCCTAGACATTGCTGATCAATTATTCATTCGTGATTTATCAGTAAAATCTATGTTGACCAAGGAAAAggataatgaaatttttcaagaacttAACTCAGAGAATGAGCATAATGATTCAAGATTAAATTCATTTgatcaatatcatgaaaagaACCCAGATGTTTCTAGTTTCTGTCCAAATGTAGCAAAAGCATTTGATACTCCTcccataattatttttgattggGGAAAACTTTTACAGGAAAAAAGTGAAGGTACCCTTCGACGATCATATGGAAGTAGTGAACGCCAAAATGTACTGGATGCTGTGAACCGTGGAATGTCGGGTGCACAGGCTTCGAGACTATTTGGAATACCAAAAAGTACAGTTTACTCTTGGTTAAACAAATCTGAAGGACTAAATACAAGTAAAAACTCTGCAGTTCTGAATGAATCTTCATCAGGAACTGCACGAAGATCTTACTCAGATGAAGATCGTCAAAAAGTTGTTAGAGCTATCGGGAGTGGAATGTCCGTCGCAGAGGCTGCCATACAATTTGATATACCTAAGAGTACACTATATTCTTGGGTGAAGAAATCAGACACCTTAGATACCAGTAAAAGCTCTGCAGTCATCAACTCATCTCCATCTCCTTCGAGTACTACTCGAAGATCTTATTCAGATGCAGATCGCCAAAAGGTATTAAACGCTGTTAGTAGTGGAATGTCTGGTGCAGAAGCTTCCAGGAAATATGATATACCTCAGAGTACAGTTTATTCTTGGGTGAGGAAATCAGATGACTACTTGAGCACCAGTAAAAACTCTGCACTAGTTGAATCACCTCCATCAAGCAATTCTAGACGATCGTATTCAACTGCTGAAAAACAAAGTGTAGTGAACGCCGTCAACAGTGGCATGTCTGGTGCGGAGGCTTCAAGAAAATATGATATACCATCAAGTACAGTTTACTCTTGGATTAAGAAGTCAGAAAGTCCGGATGCAAGTAGAAGAACTTCTATAAGTTCATCTGTGGATACCTCTTATTCTTCTGCATCTGGAAGACGTTCGTACACACCAAGCGAGCGTCAAACTGTCGTCAATGCCATTGCTAATGGGATGAGCGGAGCTGAAGCTGCTAGGACTTATGGAATTCCTCCGAGTACTGTTTATTCATGGAAAAATTCTGTGCCAGCAGCCCCTACTATGAATTGCAGCCGCCGATCAAATACCTCTACTTCTATAAGTTCATCTGTAGATACCTCATATTCTTCTGCCTCTGGAAGACGTTCGTATACACCAAGCGAGCGTCAAACTGTCGTCAATGCCATTGCTAATGGTATGAGTGGAGCTGAAGCTGCTAGGACTTATGGAATTCCTTCGAGTACTGTTTATTCATGGAAAAATTCTGTGCCAGCAGCCCCTACTACGAATTACAGCCGCCAATCAAATACCTCTTATGGTTCGTCGAATATTTCGTACGGAGCTTCAAATACTTCATATGGATCTTCAGGTAATGAAAGCATtgatgttataaaaaatacagtgTTATAG
- Protein Sequence
- MSEKTQQHHLVRRIQLKEDPYSKDEIMKLLRESEPNATLCCEFGAVGCHKPILAARSAHLMELLRRNPCAHPIFYVPGAKHDELQAVAHFMYHGEVDVELSKLRHFYKAVEPLQIHGLQWKNTKEKSEDKVNSDDYDDIYRITCVSKNSENADLKKALVVLYDNEEMIDMTLACDDGSFKCHKSVVTACSDYVKNVLSDSIKDPVIFLLGTKERELEAIIDLMYNGRIKVRKSDVQRVLDIADQLFIRDLSVKSMLTKEKDNEIFQELNSENEHNDSRLNSFDQYHEKNPDVSSFCPNVAKAFDTPPIIIFDWGKLLQEKSEGTLRRSYGSSERQNVLDAVNRGMSGAQASRLFGIPKSTVYSWLNKSEGLNTSKNSAVLNESSSGTARRSYSDEDRQKVVRAIGSGMSVAEAAIQFDIPKSTLYSWVKKSDTLDTSKSSAVINSSPSPSSTTRRSYSDADRQKVLNAVSSGMSGAEASRKYDIPQSTVYSWVRKSDDYLSTSKNSALVESPPSSNSRRSYSTAEKQSVVNAVNSGMSGAEASRKYDIPSSTVYSWIKKSESPDASRRTSISSSVDTSYSSASGRRSYTPSERQTVVNAIANGMSGAEAARTYGIPPSTVYSWKNSVPAAPTMNCSRRSNTSTSISSSVDTSYSSASGRRSYTPSERQTVVNAIANGMSGAEAARTYGIPSSTVYSWKNSVPAAPTTNYSRQSNTSYGSSNISYGASNTSYGSSGNESIDVIKNTVL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482569;
- 90% Identity
- iTF_01483986;
- 80% Identity
- iTF_01483986;