Basic Information

Gene Symbol
ct_1
Assembly
GCA_902732785.1
Location
CACVKI010137450.1:1-16220[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.4e-28 3.3e-24 84.8 0.0 2 72 398 469 397 474 0.95
2 3 1.4e-32 1.3e-28 98.8 0.0 3 77 851 926 849 928 0.96
3 3 2.9e-31 2.8e-27 94.6 0.0 3 76 1079 1153 1077 1156 0.96

Sequence Information

Coding Sequence
aTAAGCCAGTTGAGAGATGAGCTGGGCAGGCTGCAGGTGAGCCTGCAACGCATTCAGGAGACCACGTCACAGGCCACGTCGAGGCTCGAGGAGGAGCTCGAAGCGCGCCGCCAACACATCGCCCTGCTCGAGGCCAAGCTCGAGCGGCAAAAGGACTACGAGGAGCTGAAGCGCGAGATTCAGGTGCTCAGGTCGGTCGATCTCGCACAGATCGCCGAGTCCGGCAAGAATCTCGAGCAGTTCTTGATCGAGCGAAACAAGGCGCTACAGCAGCAGGCCGCCGACGCTCTCAAGCCACCCAGCACACCCGATGCCTTAGGTGGACTCTCGTCGCCCCTGCAGCGCACCGCGAGCGCTTCGCCCCACGGCTCGGCGGCGGCTCAGGCAGCTGCCCCAGCTTCCCTAGTCAGCTCCCAAGCACCACCATcacaaccaccaccaccaccgtcaCAAGTACCACCACCACATAGCCGCTCGACTCCCACACCTTCGTGCTCGTCGTCCGTGAcctcgacgacgagctcgtcGATCCTGTTCCCGCCACCCTTGCAGAACGTCGAGACGTTCGGCTCGTTCCTCGGCGAGGAAATCGTGGCCAACTGGAGGCGTACACTCGAGAGATCGATCAtcaatcagcagcagcaacagcagcagcagcaaagcacTGCTCAAGCTCAGCCAAGTCTAAATCATCAACTTGCATCGCCAACAGATTGCAACGTCGTCAAGTCGAGCACACCCCAGGAGGCCGAGAAAGCGCCGACGCCGCTCTCGGGTCACGAGACACCCACGCTCACGTCTCCGTcggtgcaacagcagcagcagcagcagacaccaTCTTCGGTCAGTGACCTGGTGAACGGGCCGATCGGCGCGACACTGCCGACCAAGAGCCCGGCCCAGGCCACGGACTCCGAGTGCCACAGTATTAACAACAACAGCCATCACTtggccaacaacaacaacgtgaTCGGCGTCGGCTCGGGCGGCGCGACGAGCGGCAGCCTCAACATGCTCGAGAGCCTCAAGAGCCCGTTCCGTTTCGACGAGCGAACCCATCCGTTCCGCTTCGGCGACGAGTACGGAGTCGCGGGCATGGCCGGCCGCCTCGGCGAGTCCCTCATACCCAAGGGCGACCCGATGGAGGCCCGGCTCCAAGAGATGCTGCGCTACAACATGGACAAGTACGCCTCGCAGAATCTCGACACGCTGCACATAGCCAGACGGGTGCGCGAGCTACTGTCGATTCACAACATTGGCCAGCGCCTGTTTGCCAAGTACGTGCTAGGTTTGTCTCAGGGAACGGTGAGCGAGCTCTTGAGCAAACCCAAGCCGTGGGACAAACTGACGGAGAAGGGACGCGACAGCTATCGCAAGATGCACAGTTGGGCCTGCGACGACAATGCCGTCATGCTGCTGAAATCCCTCATACCCAAGAAAGAGTATGTTTCAGGCAAGGAACAGAGTAGCGCCGGCGGCATGCCCGGCTTCCCGCGGCCCTCGCAGGACAGCCAGTCGTCCATGCCGGGCGTCGGCAACAGCGCCAGCGACAACGGCACCTCGGGCGGCGCGCCGGGCTCCGTCTCGGCCCAGGAGATGAgccaggagcagcagcgcatcgCTCACATGCTCTCCGAGTCCGGCCACATGCTCAGGGCGCAGCAGAGCGAGCACGAGGCGTCCAACGACGCCGACAGCAAGAGCCCGAGTCGACTCAACTGCCCGAGCCCGTTCGGCAGCAAGGACAGCCAGAATCGCCGCCTCAAAAAGTACGAGAACGACGACATTCCCCAGGAGAAGGTGGCCAGAATTTATCAGGAGGAATTGGCCAAACTCATGGTCCGCCGCAACGAAGAGATGCGAGGCGCGATTCCCTCCAGTGCGATGTTTCCGTTTTTCAGTGGTCAAAATCTCCAAGGCATGGACCGCACTCAAGACGAAATCAGAATGGCTCTGGAAGCCTATCAGCGCGAGCTGCACAAGTTCAGCACCGCTCAAAGTTTGCCGTACCCGCCACAAATATCCAGCCTATTGGCGCTCCAGCAGCACGCGATTCAGCAACACCACTTGGCGACAAACGGCGCCGCATCGAATTCggccgcagccgccgccgcggcagcagcagcagcagcagcagcggctgccGCCCAGGATCTGAGCCTCGGCAACATCCTCAGAAACAAGATGATCAACGGCGTGTCGGAGgaggaaaaggaaaaaatggaGGAGGCCATGAGGCACGCGGGCAGCGCATTCAGCTTGGTGAAACCGAAGCAGGAGCCTGCGTcgagcgccgccgccgccgtggGCAGCCAGTCGACCCCCGGAGGCTCGTCGGCCAGCTCGCCTCTGGGCAACTCGATTTTGCCGCCGGCCATGACGCCCAGCGAAGAATTCACGGGCGCCGCGGCGGCCAGTCCGCTGCAACGCATGGCGTCTATTACGAATAGCCTGATCAGCCAACCGTCCACTCCGACTCATCACTCGGGCAATCAACGACCGCTCAAAGCCGTTTTGCCTCCCATcactcagcagcaattcgatatttacaataatctCAACACAGAAGACATTGTCAAGAGGGTAAAGGAACAGCTTTCACAATATTCGATATCTCAACGTCTGTTTGGTGAATCCGTTCTCGGTCTATCTCAAGGATCAGTGTCGGACCTTTTGGCAAGACCTAAACCGTGGCACATGCTCACTCAAAAAGGACGAGAGCCTTTCATACGCATGAAAATGTTCCTAGAAGACGACAATGCTGTGCACAAATTGGTAGCCAGCCAATACAAAATAGCACCGGAAAAGCTCATGAGGACCGGCGGCTACGGCGGCCTGCCTCGTAAGTTTAACTCAGCTTGCGGAACACCGATGAAGCCAATGCCACCCACGAAACTCGTCCAAGAGCAATTACAAAATGCAGCGAAAGCCCAAGCCGCGGCACAAGCGGCCGCGGCCGCTCAACATCAGCAAGAGAGTCAGATGCAACTCGGTCCACCACAGCCAAGTCCACAACTGTCGCAACAATCGCCAATGATGCTGACTCCGCCGGGAAGCGTACACGCGCAGTTGAGCATTCAAGAGCTCCAGaagaagcaacagcagcagcagcaacagcagcaccaaAGCGGCCAGATGAACCTGCACTCGCCGCACCACCAGATGGCGCAGTCACCACTGCGCGCTCTCCATCCACACATCTCGCCGAGCGTTTACGAAATGGCGGCCCTGACCCAGGACCTTGACACGCAGACTATTACGACCAAAATCAAAGAGGCTCTCTTGGCCAATAACATTGGCCAAAAGATATTCGGCGAGGCAGTTTTGGGTCTGTCACAGGGATCAGTCAGCGAACTTCTGAGTAAACCTAAGCCGTGGCACATGTTAAGTATCAAGGGGCGAGAGCCTTTCATTCGAATGCAACTTTGGCTAGCCGATCCTTCAAATATCGAGCGCTTGCAAGCGTTGAAGAACGAGCGACGAGAGGCTAATAAAAAGCGACGCAGCAGTGGGCCAGGCCACGACAACAGTTCCGACACTTCCAGCAACGACACGGCTGAGTTCTATCACGCAGCTTCCCCTGGACCAGGTCCGGGTCCCACATCGGCCAAGAAACAGCGTGTACTGTTCAGCGAGGAACAAAAGGAGGCTCTACGACTGGCATTTACCTTGGATGCGTACCCGAACGTACAAACCATCGAGTTTTTGGCCGGTGAGCTCGGTTTGTCATCGCGAACGATCACCAATTGGTTCCACAACCATCGCATGCGGCTGAAGCAGCAAACGCCACACGGACCACCCGAGCCACCATCACCCTCGCGCGAACCTGGCCAGCCGTTTGACGCCGTGCAGTTCCGCGTACTCCTAAACCAAAGACTCCTAGACCTGCAAAAAGAACGTTTGGGCCTGGGAAACGTAACTCTCAACTACCCACCGTACTTCAATCCAAATCTCGCGGCCCTCGTTGGCAATGCTCTAAAAGAACAATGCGCTGGTCTAGACTTGTCGATGGGCTCGCTCAAAAGAgaattcgacgacgacgacggcgatgaCGCCATGAGCAATCTCGGAAGCGAAGATTCGGACGGTTCTAGCGGCAGCGTGAAAGGTCGCGAGTCTGCGGATATTCCAGCACCAGCCAACAGCGCCCCCAGTGGTGGCGTCGGAAGTGGTGCCTCCGCAGGCCGCTCGAATCGCCGCAAGCCGGCCGCGCCTCAGTGGGTGAATCCCGAATGGCAGGAGCCATCGGCGGCTCGTGCTGCAGCGGCCACagcagctgccgctgccgacGAGGTCATTATCAACGGTGTCTGCGTCATGCAAACCGACGATTACAGCGTGAAGCGAGAGCCCACCGAGGAAACCGTCCGAGTCGATCCAACTCCAGTCCTCGATCGATACGAAGACGAGGCACAGAGCGACGACGCTTCTTCCTCGGTCTCGGCTCACAACGCTCAAGCAGATCGCGGAAGCTTGTCGCCGAGCCCCAAATCGACGGTCAACAGTCCGGCCGCATCGCCACGACCGCCGTCGGCTTCGCAGAGTCAAACTGCCGAAAATAGTCCTAAGGAACCTGTAAAGGCTGAGCCCGATGAAACCTgggatttttaa
Protein Sequence
ISQLRDELGRLQVSLQRIQETTSQATSRLEEELEARRQHIALLEAKLERQKDYEELKREIQVLRSVDLAQIAESGKNLEQFLIERNKALQQQAADALKPPSTPDALGGLSSPLQRTASASPHGSAAAQAAAPASLVSSQAPPSQPPPPPSQVPPPHSRSTPTPSCSSSVTSTTSSSILFPPPLQNVETFGSFLGEEIVANWRRTLERSIINQQQQQQQQQSTAQAQPSLNHQLASPTDCNVVKSSTPQEAEKAPTPLSGHETPTLTSPSVQQQQQQQTPSSVSDLVNGPIGATLPTKSPAQATDSECHSINNNSHHLANNNNVIGVGSGGATSGSLNMLESLKSPFRFDERTHPFRFGDEYGVAGMAGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARRVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHSWACDDNAVMLLKSLIPKKEYVSGKEQSSAGGMPGFPRPSQDSQSSMPGVGNSASDNGTSGGAPGSVSAQEMSQEQQRIAHMLSESGHMLRAQQSEHEASNDADSKSPSRLNCPSPFGSKDSQNRRLKKYENDDIPQEKVARIYQEELAKLMVRRNEEMRGAIPSSAMFPFFSGQNLQGMDRTQDEIRMALEAYQRELHKFSTAQSLPYPPQISSLLALQQHAIQQHHLATNGAASNSAAAAAAAAAAAAAAAAAQDLSLGNILRNKMINGVSEEEKEKMEEAMRHAGSAFSLVKPKQEPASSAAAAVGSQSTPGGSSASSPLGNSILPPAMTPSEEFTGAAAASPLQRMASITNSLISQPSTPTHHSGNQRPLKAVLPPITQQQFDIYNNLNTEDIVKRVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGLPRKFNSACGTPMKPMPPTKLVQEQLQNAAKAQAAAQAAAAAQHQQESQMQLGPPQPSPQLSQQSPMMLTPPGSVHAQLSIQELQKKQQQQQQQQHQSGQMNLHSPHHQMAQSPLRALHPHISPSVYEMAALTQDLDTQTITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLADPSNIERLQALKNERREANKKRRSSGPGHDNSSDTSSNDTAEFYHAASPGPGPGPTSAKKQRVLFSEEQKEALRLAFTLDAYPNVQTIEFLAGELGLSSRTITNWFHNHRMRLKQQTPHGPPEPPSPSREPGQPFDAVQFRVLLNQRLLDLQKERLGLGNVTLNYPPYFNPNLAALVGNALKEQCAGLDLSMGSLKREFDDDDGDDAMSNLGSEDSDGSSGSVKGRESADIPAPANSAPSGGVGSGASAGRSNRRKPAAPQWVNPEWQEPSAARAAAATAAAAADEVIINGVCVMQTDDYSVKREPTEETVRVDPTPVLDRYEDEAQSDDASSSVSAHNAQADRGSLSPSPKSTVNSPAASPRPPSASQSQTAENSPKEPVKAEPDETWDF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01484431;
80% Identity
iTF_01483724;