Basic Information

Gene Symbol
XBP1
Assembly
GCA_902732785.1
Location
CACVKI010140742.1:90806-92568[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-14 1.2e-11 44.6 15.7 2 58 180 236 179 237 0.95
2 2 0.0014 1.4 9.1 4.8 25 59 224 258 223 263 0.75

Sequence Information

Coding Sequence
ATGGCACCTCAGGTCACTTTGacaaaacagcagcagcagcctttaGTGGCTTTGAGAAAGAATAATGTCAAGCTACCAAAGCTGTGCATAAAGAATGTTCTAAAACCAGGAGTACATTTTCAACCAATTCCATCAACAATAACTTTCTTAGAGCAACTGTATGGTACAGCAAAAGAAAGACAACAAAAAACATCTGCATTCCAACCTATAATAATTACATCTGAAAATCAGCCACAAATTAAAACTGTAACAGTTAcaacgaaagaaaaacaaattgaacCACAGTTATTGCAACCAAAATCGATAGAACAGCAAGTGACAAAACATGTTATTCAGCAACCGCAGCAAATAACCAACCCAATTCCAGTCGAGAATGGAAATGAAATAATGTTAACGTTCGATTCTACGGACGAACTATTATTGGTAAAAGAAGAGCCTGAAGTAATGGAAGCTCAAGATGTCACACTCATTCCAGATCTTTTAGAAgattctcctcctcctcctggcAAAAAAAGGCGTTTAGAAGGGCTCACATACGAACAAAAAGCCTATAGAAAaaaactgAAAAACAGACTGGCAGCACAAAATTCGCGGGATCGAAAAAAAGCCAAAGTTGAAGAATTAGAGAAAAGCCTTGTAACCCTAAGGGAAGAGAATACGAAACTCGTCGAAGAAAATAGGACACTTGAAGAAAGGAACAAATCACTGACCGAAGAGATGGAAGCGCTTCGTTCCGCAAGCCAGGCATTAAAGGAAGAAATGGAAAAGATCAAAGGCTCACAGAGCAAATGCTCGTGCGGCTCGAATCCGAGTCCGGTGACAGTTGTCGAATGTACTGATTCAACGCTGGGATCAGCAGTATCCTCAAACCCTCTGCAGCAGGGTGGACCAGTACAGACGACGAGTCGTCGGGCGACGGAAGACAGCTTGAGCGAGCTGGTAGCGAATGTAgccttttttctccttctgaAGGTCTTACTTTTGGATTGCCGGAAAAAGAATGGCTCAGCCAGTTTGACTACTTGGTTAACCCAATTCTTGACAAGCTTTCCACCGGGGATGAAGGAAAAACTTCTCAGTTATGCACAAGCGAGGAACTTCAAAAGAGCTCAGGAGAGGAAACAAAGGGAGAAGCAAATGGTAAAAGCCATGAGGAACAGTGTGTTATTGGGGAGAAAATGGTGGGGCCGAAATTGTATTCTAAGGCCAACGAGGACGAAACCGTAA
Protein Sequence
MAPQVTLTKQQQQPLVALRKNNVKLPKLCIKNVLKPGVHFQPIPSTITFLEQLYGTAKERQQKTSAFQPIIITSENQPQIKTVTVTTKEKQIEPQLLQPKSIEQQVTKHVIQQPQQITNPIPVENGNEIMLTFDSTDELLLVKEEPEVMEAQDVTLIPDLLEDSPPPPGKKRRLEGLTYEQKAYRKKLKNRLAAQNSRDRKKAKVEELEKSLVTLREENTKLVEENRTLEERNKSLTEEMEALRSASQALKEEMEKIKGSQSKCSCGSNPSPVTVVECTDSTLGSAVSSNPLQQGGPVQTTSRRATEDSLSELVANVAFFLLLKVLLLDCRKKNGSASLTTWLTQFLTSFPPGMKEKLLSYAQARNFKRAQERKQREKQMVKAMRNSVLLGRKWWGRNCILRPTRTKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01484390;
90% Identity
iTF_01484390;
80% Identity
-