Tden003421.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000006.1:1532605-1534358[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 11 0.35 69 4.4 4.2 17 43 167 190 153 191 0.84 2 11 0.00061 0.12 13.2 0.8 16 44 194 219 192 219 0.93 3 11 0.033 6.4 7.7 0.4 19 43 225 246 223 247 0.73 4 11 0.0066 1.3 9.9 2.3 19 44 253 275 241 275 0.90 5 11 1.1 2.2e+02 2.7 0.7 19 29 281 291 278 303 0.79 6 11 0.0034 0.66 10.8 1.3 18 44 308 331 294 331 0.88 7 11 0.0014 0.27 12.1 1.8 16 44 334 359 332 359 0.92 8 11 0.31 61 4.5 1.0 19 43 365 386 362 415 0.91 9 11 0.48 94 3.9 1.2 15 42 420 444 413 446 0.78 10 11 0.03 5.8 7.8 0.7 23 44 456 474 449 474 0.85 11 11 1.6 3.2e+02 2.2 0.3 22 44 483 502 481 502 0.83
Sequence Information
- Coding Sequence
- ATGGAATCCAGCAGCGTATTGAACTGTGCTGTCagAGTAAAAACTGAGCCTTGCGATGAGTCACTTTTGGAAATCAATCGTAATATAATTGACAAGACTCGAGATGGGCAGGATGTTCAATTCTCAAGATTTCTGCGGGAAAATCCAAACCACAAGTTTCAAGAATATGACGGAATGTCTGAACCTCGTGAAGACATGGGAATAGTTTTGGAATGTCAAGACGTGAAGCCGAGTTTGAGTTTATTGGCAGTTCAGAAAATTGAAGACtactctgaaaacttgcacAGTACGAAATATACTCGAGATTatccaaataaaataaaaatagaaaatatggatggagtgaaaaaagaatatgTTGGTAACGTTGCGGAAGAATCGAGTTTGAATTTAAACTGCGAATTTAgggagcaaaaagaaaaaggaagaattACAACAGACTTCAATGACCGACAGAGATTAAAAACCCACATTAGTCCGATGCATAGTGGTTCTACCCACGTATGTAATGTTTGCAGAAAGACATTCAAATCGAACCGTAATCTTCAAGGCCACATCAATGCAGTGCATAATGGTGTCAAATATACATGTGACATGTGTGGAAAGACTTACACAACAAAGTCTAATCTCCAAATGCACATCAACTCAGTGCATAAGGGTATCACACATGCATGTGAAATATGCGGAAagatattcaattataaaaatactcttCAAATCCATTTCGCTACCGCGCACAATGGTGTTACCCATGCGTGTGatatttgtagaaaaaaattctcaagtaAGGGTAacctcaaaaaacacatagaTTCGACGCATAGGGGTATTTCCCACTCGTGTGGTACATGTGGAAAAACATTTAAACAAAAAGGACATCTTAAATaccacatcgattcggtgtACAATAGTATCACATATGAATGTAATgtatgcggaaagaaattctcaaACAAGAGAAATCTCAATGTCCATATTGATTCGGTACATAATGGGGTCAAATATACATGTGACATATGTGGAAAGACTTACACACAAAAGTCTCATCTCCGAATGCACATCAACTCAGTGCATAATGGTATAGCATTTGCATGCGATGTATGCGGGAAGAAATTCTCAGACAAGAGTAAACTTAAAATTCACATCGATTCTATTCATAGCAAAATCACTCATAAATGTGatattcgtgaaaaaaaattttcaaatcgatATAATCTCAGGAGACACGATAGAGTGCTACATAAGGGTATTATGAACACACGTAAAACATGTGAGACTTGCGGAAAGACGTTTACGAACATGACTGAACTCAAATTACATATTGATGCAGTGCATATAGGTGTCGCGCATGAATGTGACACACCTGGAAAGATATTCAAATACAAGAAAAATCTCCGAAACCATATTAATTCAaagcacaatggtgtcacgcATACTTTTGATGTATGCAGAAAGAAATTTCCACAGAAGAGTCACCTCAAAAGACACATAGATTCGGTACATAATGGTGTAACCCATGCATGTGATacatgcggaaaaaaattcggacaagAAAAGAATCTTAAAGCCCACGCAGTTATGGCACACTTGCATTCACACAATAtgcataaataa
- Protein Sequence
- MESSSVLNCAVRVKTEPCDESLLEINRNIIDKTRDGQDVQFSRFLRENPNHKFQEYDGMSEPREDMGIVLECQDVKPSLSLLAVQKIEDYSENLHSTKYTRDYPNKIKIENMDGVKKEYVGNVAEESSLNLNCEFREQKEKGRITTDFNDRQRLKTHISPMHSGSTHVCNVCRKTFKSNRNLQGHINAVHNGVKYTCDMCGKTYTTKSNLQMHINSVHKGITHACEICGKIFNYKNTLQIHFATAHNGVTHACDICRKKFSSKGNLKKHIDSTHRGISHSCGTCGKTFKQKGHLKYHIDSVYNSITYECNVCGKKFSNKRNLNVHIDSVHNGVKYTCDICGKTYTQKSHLRMHINSVHNGIAFACDVCGKKFSDKSKLKIHIDSIHSKITHKCDIREKKFSNRYNLRRHDRVLHKGIMNTRKTCETCGKTFTNMTELKLHIDAVHIGVAHECDTPGKIFKYKKNLRNHINSKHNGVTHTFDVCRKKFPQKSHLKRHIDSVHNGVTHACDTCGKKFGQEKNLKAHAVMAHLHSHNMHK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482846;
- 90% Identity
- iTF_01482846;
- 80% Identity
- iTF_01482846;