Tden023153.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000137.1:346629-348424[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0035 0.69 10.8 1.6 17 44 148 172 138 172 0.85 2 13 0.45 89 4.0 1.0 18 43 177 199 174 200 0.76 3 13 0.19 38 5.2 1.3 18 30 205 217 189 231 0.82 4 13 0.32 63 4.5 0.7 19 29 233 243 222 258 0.85 5 13 0.78 1.5e+02 3.2 3.8 19 30 260 273 246 287 0.75 6 13 3.4 6.7e+02 1.2 1.2 18 29 287 298 284 310 0.74 7 13 2 4e+02 1.9 2.7 18 29 315 326 304 344 0.82 8 13 0.85 1.7e+02 3.1 1.5 19 37 344 359 337 370 0.75 9 13 0.12 23 5.9 4.3 18 44 371 394 365 394 0.91 10 13 0.039 7.6 7.4 0.1 18 43 399 421 396 422 0.80 11 13 0.0017 0.33 11.8 4.7 18 44 455 478 444 478 0.91 12 13 6.3e-05 0.012 16.3 2.3 19 43 484 505 481 506 0.95 13 13 0.96 1.9e+02 3.0 0.6 17 43 508 531 507 532 0.90
Sequence Information
- Coding Sequence
- ATGGAATTCAGTGGTGTATATAACTGTAATGTCAGAGTGAAGGAGGAACCAAATGATGATTTCccaattgaaaatgaagattaTAAGATAATTGACAATGCAGACAGAGTTAAAACTGAAGAATCCTCGCGATGtcaagaaaattttactCATGGACCTAAGGATATCGAAATAGAATTCGAATGTAAGGACGAAAAGTCAAGCATTAACTTATTAGTGGTCAAAAAGATAGAGGACGATTATCCAGACCATTTGCTGCATATGAAATATAGTCACGATTATCAaagtcaaaagaaaattaaagaagaaattgTCGACGATGTAAAAAAGGAATTGTATTTGGATAGTGAACTCAGTGATGCATTtgatacaaatgaaaaaacatttgctCGAAAAAGTCTATGCGAAACCCGCAGTGATAAGGCACATAATCGTGCGAAACATCCATGTAATATATgcggtaaaaaatttgaaacgaaAAGTAATCTCAAGGTCCACATCGATGCAGTTCATAATGGTGTTAAACATGCGTGTGGTAtgtgtggaaagacattcacacaaaaaagttatctcaaaatccacatcaaTGCGATTCATAATGGTATGGCACCAACATGCGAAGtgtgtggaaagacattcacacGAAAAGGAGATCTCAAGATCCACATCGATGGACATAATGGTGTTAGACATGCGTGTGGTATGTgtgaaaagacattcacacgAAAAAGAGATCTCAAGATCCACATCGATGGACATAATGGTGTTAAACATGGGTGTGGTATATGTGGAAAGAAATTCTCACAAAAATGTagtctcaaaattcacatcaaTGCAATTCATAATGGTGTTCAACATGTGTGTGTTAcatgtggaaagacattcaaACACAAATTTAGTCTCAAAATGCACATCAATGCGATTCATAATGGTATGGCACCAACATGCGAAatatgcggaaagaaatttcaaaCGAAGGATAAACTCAATATCCACATCGATGTAGTACATAATGGTGTTAGACATGCGTGTGGTAtgtgtggaaagacattcacacaaaaaCCTCACCTCAAGACCCACATCGATGGAGTACATAATGGTGTTAAACATGCGTGTGGTAtgtgtggaaagacattcTCACAAAAATCTCATCTCAAAATGCACATCAATGCGATGCATAATGATATGGCACCTACTTGCGAAATATGCGGTCAAAAATTTACACGAAAGGGTAGTCTAAAGGTCCACATCGATTCAGTTCATAATGGTGTTAAACATGCTTGTGGTATGCgtgaaaagacattcacacaaaaaGGAGATCTCAAAATGCACATCGATGTGATGCATAATGATATGGCACATACTTGTGAAATGTGTGGAAAGAAATTCGCATATAAGAGTtgtctcaaaatccacatggATTCAATGCATAATAAGATAACTTACGCATGTAATACGTGCGGCAAGACATTTTCGTATAAGCATCGTCTTATATCTCACATTAAAACGCAGCACGAAGGCATCGCATGCGCTGTCTgcggagaaaaatttaaacatagaaaatatttatacagaCACGTCAAAAGTGTGCATGAGGGCAATACTCAAGCACGAGATCAATGTAAAAGATCTTAA
- Protein Sequence
- MEFSGVYNCNVRVKEEPNDDFPIENEDYKIIDNADRVKTEESSRCQENFTHGPKDIEIEFECKDEKSSINLLVVKKIEDDYPDHLLHMKYSHDYQSQKKIKEEIVDDVKKELYLDSELSDAFDTNEKTFARKSLCETRSDKAHNRAKHPCNICGKKFETKSNLKVHIDAVHNGVKHACGMCGKTFTQKSYLKIHINAIHNGMAPTCEVCGKTFTRKGDLKIHIDGHNGVRHACGMCEKTFTRKRDLKIHIDGHNGVKHGCGICGKKFSQKCSLKIHINAIHNGVQHVCVTCGKTFKHKFSLKMHINAIHNGMAPTCEICGKKFQTKDKLNIHIDVVHNGVRHACGMCGKTFTQKPHLKTHIDGVHNGVKHACGMCGKTFSQKSHLKMHINAMHNDMAPTCEICGQKFTRKGSLKVHIDSVHNGVKHACGMREKTFTQKGDLKMHIDVMHNDMAHTCEMCGKKFAYKSCLKIHMDSMHNKITYACNTCGKTFSYKHRLISHIKTQHEGIACAVCGEKFKHRKYLYRHVKSVHEGNTQARDQCKRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482818;
- 90% Identity
- iTF_01482818;
- 80% Identity
- iTF_01482818;