Tden019166.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000097.1:119384-128367[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.011 2.2 9.1 0.2 18 44 236 259 234 259 0.87 2 12 0.044 8.6 7.3 0.3 19 44 265 287 262 287 0.93 3 12 0.98 1.9e+02 2.9 7.1 18 44 541 564 530 564 0.90 4 12 0.83 1.6e+02 3.2 1.8 18 39 569 587 566 596 0.81 5 12 0.021 4.2 8.2 5.1 3 44 583 620 581 620 0.88 6 12 0.025 4.9 8.0 0.4 18 30 625 637 622 651 0.83 7 12 0.31 61 4.5 1.4 15 44 659 685 647 685 0.82 8 12 0.00076 0.15 12.9 4.4 12 44 682 711 673 713 0.87 9 12 1.2 2.4e+02 2.6 1.4 15 44 714 740 711 740 0.85 10 12 6.1 1.2e+03 0.4 2.8 12 29 737 754 733 766 0.80 11 12 0.088 17 6.3 0.1 18 43 827 849 823 850 0.91 12 12 5.7e-06 0.0011 19.7 4.1 1 44 839 878 839 878 0.84
Sequence Information
- Coding Sequence
- ATGAGTGAATTCGAACAGGCCGGTGCTCGTTACAAGTCGATATATTATAGACCTTGTAATTATTTCAGGGTGAAACAGGAACCTTCTGAAGTGTCGTTTAATGAATGTGGAGATGGAATGATGAACGATTCAATTGATCATAAAAATGTCCAACAATTGCCTTTTCAAGATAATTTGGTCCTTCGGATTCCAAGATGCGACGATATGATAATTGAATTCGAATGTCAAGATGTAAAGCCCGATAAGAATATATTGTTACCAAAGAAAAGGAATCcaaacgaaattaaaaaagagccCAAGGAAAAACTGAAAGAAGAAGTTGTCGACGACATAGCAGAAGAATCGAATTCGAACCTTGATGGTGAATTCAATAACGATAtggaaattgaatttgaatgtCACGACGTGAAGCCTAGTGTGGATTTATTAGTAAAGCATAAAAGTGACGATAACTCTGGAAATCATttacaaaatgataaaaatagtcATAAAAGTCAAAACATTATGAATGTAGAAATCAAGAGGGAAATAAAGGAAGAAATTCTTAGCGATGTTCCAGAGGAATTTAATTTGGACTCTGAAGTGAttgaacaaaatgaaaatcatcAACATAGTCTCAGTGCACACAGTGACAGTGGTAGCAACTACGCATctAAGAGTCATCTCCAACTCCACATCGATTCGATACATAATGGTATCGGGCCTAAATGTGAAATATGTGGAAAGATATTTTCACGCTATTTAACTATGCAACGCCACATCGATTCGATTCATAAAGGTGTCACTAAGTCATGCAAAATATGTGGAAAGGCATTTCCTCTTCAAACTAATCTCAAATTACACATGGATTCTGTGCATAAGGGTATTAACCATCCGGTGAAAAAGGAACCTTCTAAAGTGTCGTTTAATGAATGTGGAGATGGAATAATGAACGAGCCAACTGatcataaaaatttccaaCTATTGACATTTCGAGATAATTTGGTCCTTCGAATTCCAAGATGCGACGATATGACGATTGAATTCGAATGTCAAGATGTAAAGCCCGATAAGAATATATTGTTacaacaaaagaaaatagacAATTACTCTCAAAATTACTTGCAGAATGTAGTAGATATCAGTGGTTATAAACCTTTGAacagagtgaaaaaagaaccCACTGAGAAATTGAAAGAAGAAATTATCGGTGACATGacagaaaaatcgaattttgaCTGTGAACTTAATAATGATATGGAAATAGTTTTTGAATGTGAAGACGTCAAACCCAGTGTGGATATTCCTGAAGTTcgaaaagcgaaaaaagaaaattttattgaaggTGCAGAAGAAATGGATATGAATTATGAATTAGGCAAACAtaacaacgaaaaaagaattacGAAAAAGTCTGGCCATCAACATAAACTCAAAGCACAAAGTGATACAGCTCAAAGCAGTAACATTTCCGCACGTAAATcaggtggaaaaaaaatttctgaaaaaagtaAACGCAAATTCCACATCAATTCGGTACATAAAGTTAGGAGGCATAAATGCGGTGAGTGCGGATACAAATTTAGGGGTATGAATGctctcaaaattcacatcgattcggtgcatagTAACATCACTTATGAATGTAATATATGCAAAAAGACATTTGCCTGTAAAATTTATCTCAGAAATCACATTGTTAGGATGCATAGTggaatcaaattttcatgtgATACATGCGGAAAGGAATACTCTACCAAGAGTCTgctaaaaaaacacatcgatttAATACATAATGGTAAAATGCATAAATGCGATATATGTGGAAAGACATTTAGAATCAAAAGTCATCTCCAAGACCACATCGATTCGAAACATAATGGTACCGGGCCTAAATGTGAAATATGTGGAAAGATATTTTCACGCAAGTGGACTGTCAAACTCCACATTAACCTGGTTCATCTTCAAAAGCACAACCAAGCATCGGACGCTCAGGCCAAGtatgcatgtgataaatgtgAAGAAACATTTACACGAAAAGATCACCTCAACGCCCACATAGATTCTAAACATAATAAATTTGTATGTGATATATGCAAAAAGACGTTCGCAAataagaaaaatcttaaaatccacatcgatgcgATGCATAATTGTGACAGTAATTATGCATGTGATAGGTGTGAAAAGTCATTCTCCCAAAAGAGATATCTTAAAAGGCACGTTGAAACATCGCATAAAGGTTACACTTGCGATACATGCGGAAAGAAATATCCAAGTAAGGGTCATTTGAAGATCCACGTCGATTTGGTGCATAAAGGCATTAAACATCCTTGtaataaatgcaaaaagaaattctctTCGAAGGGTGAACTCAGAACACATATCGAAGTGGTGCATGATGGAGTTTCAAATGCATGCGATATATGCGGAAATACATTTACATGTAATAATTCCCTCCAAACTCACATCAACTCCATGCATTGTAAAATCACTCATAAATGTGATGTTTGCGGAAACGAATTTGCAACGAAGAGTAATCTTTATAGGCACGTTGATATGGtccataataaaattactcatGCATGTAATAAATGCGGAAAGACTTTCACAAAAACGAGTAATCTCAAAAGGCACGTTGATACGGCACATAATAAAATCGCTCTTCCATGTGATAGATgtgaaaagacattcacacgAAACTATCTGCTTAATGCCCACAAGCGTAAGATGCATCGCTAA
- Protein Sequence
- MSEFEQAGARYKSIYYRPCNYFRVKQEPSEVSFNECGDGMMNDSIDHKNVQQLPFQDNLVLRIPRCDDMIIEFECQDVKPDKNILLPKKRNPNEIKKEPKEKLKEEVVDDIAEESNSNLDGEFNNDMEIEFECHDVKPSVDLLVKHKSDDNSGNHLQNDKNSHKSQNIMNVEIKREIKEEILSDVPEEFNLDSEVIEQNENHQHSLSAHSDSGSNYASKSHLQLHIDSIHNGIGPKCEICGKIFSRYLTMQRHIDSIHKGVTKSCKICGKAFPLQTNLKLHMDSVHKGINHPVKKEPSKVSFNECGDGIMNEPTDHKNFQLLTFRDNLVLRIPRCDDMTIEFECQDVKPDKNILLQQKKIDNYSQNYLQNVVDISGYKPLNRVKKEPTEKLKEEIIGDMTEKSNFDCELNNDMEIVFECEDVKPSVDIPEVRKAKKENFIEGAEEMDMNYELGKHNNEKRITKKSGHQHKLKAQSDTAQSSNISARKSGGKKISEKSKRKFHINSVHKVRRHKCGECGYKFRGMNALKIHIDSVHSNITYECNICKKTFACKIYLRNHIVRMHSGIKFSCDTCGKEYSTKSLLKKHIDLIHNGKMHKCDICGKTFRIKSHLQDHIDSKHNGTGPKCEICGKIFSRKWTVKLHINLVHLQKHNQASDAQAKYACDKCEETFTRKDHLNAHIDSKHNKFVCDICKKTFANKKNLKIHIDAMHNCDSNYACDRCEKSFSQKRYLKRHVETSHKGYTCDTCGKKYPSKGHLKIHVDLVHKGIKHPCNKCKKKFSSKGELRTHIEVVHDGVSNACDICGNTFTCNNSLQTHINSMHCKITHKCDVCGNEFATKSNLYRHVDMVHNKITHACNKCGKTFTKTSNLKRHVDTAHNKIALPCDRCEKTFTRNYLLNAHKRKMHR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482814;
- 90% Identity
- iTF_01482814;
- 80% Identity
- iTF_01482814;