Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000080.1:497055-498410[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.069 14 6.6 1.8 19 44 159 181 152 181 0.92

2 8 0.0038 0.75 10.6 2.9 17 44 185 209 182 209 0.91

3 8 0.75 1.5e+02 3.3 8.0 3 44 200 237 199 238 0.87

4 8 0.011 2.2 9.2 0.7 19 44 243 265 241 265 0.93

5 8 0.0068 1.3 9.8 3.0 17 44 269 293 267 293 0.90

6 8 0.11 21 6.0 1.6 14 43 294 320 289 325 0.75

7 8 0.0098 1.9 9.3 1.6 19 44 327 349 321 349 0.94

8 8 0.019 3.8 8.4 1.1 5 43 370 402 366 403 0.85

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.069	14	6.6	1.8	19	44	159	181	152	181	0.92
2	8	0.0038	0.75	10.6	2.9	17	44	185	209	182	209	0.91
3	8	0.75	1.5e+02	3.3	8.0	3	44	200	237	199	238	0.87
4	8	0.011	2.2	9.2	0.7	19	44	243	265	241	265	0.93
5	8	0.0068	1.3	9.8	3.0	17	44	269	293	267	293	0.90
6	8	0.11	21	6.0	1.6	14	43	294	320	289	325	0.75
7	8	0.0098	1.9	9.3	1.6	19	44	327	349	321	349	0.94
8	8	0.019	3.8	8.4	1.1	5	43	370	402	366	403	0.85

Sequence Information

Coding Sequence: ATGGACTCCTGTGGTTTATTCAGTGGCGCTATCAGAGTGAAAGACGAGCCTTGTGATGTGTCGTTTACCGAAGATGATTATGAAACTATCGACAATACATCCGATACTAAACATTTTCAACACTTGACCTTTCTGCAAGGAAATACAacCCAAAAGTTTCAGGAATATGACGAAAATCGAGAAAATGAACTCGATGAAGATATAGAAATAGTTGTCGAATGTCAAGATGTCAAACCTGACATTAATTTATTGCCAGTTAAGAAGACGGATGATTATTCACAAAATTACTTACGGAATATGAAATACAGCGAAGATTATAAAACTCAACCCACAATTGAAACAGAAACTCTTGGAACAGTAAAAAAGGAATGTTATAGCGATGAAACAACAAAACTATATTCCAACTGTGAACTCAgcgaacaaaatgaaaaaagaagtcCTATTGATAAGGAGCACAGTGATAGAGGTCACATGTGTGACACGTGTGGgaagaaattttcaacaaaaagtaatctcaaaatccacgtCGATGCGATGCATAATGGTGTCAAACATGTATGTAAAATATGCGGAAAGAAAAGCTCAATTAAGGGTAATcttaaaaaacacatcgatgcGATGCATAATGGTACTAAGCATACGTGCGAAGAATGCGGAAAATCATTTACACATAAATCTCACCTAAAAACCCACATCGACTCGGTGCATAATCACATCACTCATCCATGTGacatatgtgaaaaaaaattcgcaaataAGAATACCCTTAAAATCCACATCGAATCAGTGCATAATGGTGTCAAACATGTATGTAAAATATGCGGAAAGAAAAGCTCAACtaagagtaatctcaaaataCACATCGACTCGATTCATAATGGTACTAAGCATACGTGCGAAGAATGCGGAAAAGCCTTCAAATATAAAGGTGATCTCAAAGTCCACATGGATACGGTGCATAATCACATCACTCATCCATGTgaaatatgtgaaaaaaaattcacaagaaAGAGTTATCTCAAGGTACACATTAATGCTAAGCATAGAAGTAACACTCGCACATTTGATtcacgagaaaaaataaatagtcaTCGAAATAATCTTAGTAAGCACGTCGAATCGTTGCCTACCATTTATGCATGCAATACGTGCGGAAAGACATTCGGACAAAAAAGAAGTCTCATAGCCCATATTAATATGGCTCATCACTAA
Protein Sequence: MDSCGLFSGAIRVKDEPCDVSFTEDDYETIDNTSDTKHFQHLTFLQGNTTQKFQEYDENRENELDEDIEIVVECQDVKPDINLLPVKKTDDYSQNYLRNMKYSEDYKTQPTIETETLGTVKKECYSDETTKLYSNCELSEQNEKRSPIDKEHSDRGHMCDTCGKKFSTKSNLKIHVDAMHNGVKHVCKICGKKSSIKGNLKKHIDAMHNGTKHTCEECGKSFTHKSHLKTHIDSVHNHITHPCDICEKKFANKNTLKIHIESVHNGVKHVCKICGKKSSTKSNLKIHIDSIHNGTKHTCEECGKAFKYKGDLKVHMDTVHNHITHPCEICEKKFTRKSYLKVHINAKHRSNTRTFDSREKINSHRNNLSKHVESLPTIYACNTCGKTFGQKRSLIAHINMAHH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482964;
90% Identity: iTF_01482964;
80% Identity: iTF_01482964;