Tden013223.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000050.1:469950-471410[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0013 0.26 12.1 1.2 13 44 60 88 50 88 0.87 2 13 1.1 2.1e+02 2.8 0.6 19 35 94 107 91 116 0.73 3 13 0.0046 0.9 10.4 1.0 18 43 121 143 117 144 0.85 4 13 0.59 1.2e+02 3.6 1.2 19 44 150 172 147 172 0.91 5 13 0.0096 1.9 9.3 2.0 19 44 178 200 175 200 0.93 6 13 0.016 3.2 8.6 1.4 19 44 206 228 203 228 0.93 7 13 0.0032 0.63 10.9 0.2 19 44 262 284 258 284 0.94 8 13 0.0012 0.24 12.2 1.5 15 44 286 312 285 312 0.86 9 13 1.3 2.6e+02 2.5 0.7 19 29 318 328 316 340 0.67 10 13 0.016 3.1 8.7 3.7 13 44 340 368 329 368 0.86 11 13 0.038 7.6 7.4 0.7 19 44 374 396 372 396 0.93 12 13 7.7 1.5e+03 0.1 2.7 18 41 401 421 398 429 0.69 13 13 0.42 82 4.1 1.2 19 44 458 480 446 480 0.89
Sequence Information
- Coding Sequence
- ATGAAGTATAGCGACGACGAAACTCGAAATGcaattaaaatagaaactcTGGACGAagtcaaaaaagaaatagattTGAATTTCGATTGTGAATTTGCCGAGCATAATGAAAAGAGAAGCGATCAAGAAGATTTCAACGATAAACATAGACTCGAAATAAACATCGATTCTGTGCATACGGGTACCAAAAATACCTGCAATACATGCAGAAAGACGTTTAAAAAGAAGGGTGATCTGACGAGGCATGTTGAATCAGTGCATAATGGTGTCACCCactcatgtgatatttgcggaaaggcATTTACTCAAAAATATAGTCTCAAACTCCACATCGAATCGATACACATTGGTGTCACGcatacatgtgatatatgcggaAAGACGTTTAAAAGAAAGGGTGATATTACGAGGCACGTTCAATCAGTACATAATCGTGTTACCCGCTCATGTGATGTTTGCGGAAAATCGTTTCCACATAAAAATAGTCTAAAATACCATATCAATTcagtgcacaaaaaaattactcatgcATGCAATttatgcgaaaagaaattttcaaccacgacgtatctcaaaattcacatcgaTTCAGTGCACAATGGGATTAACCAatcatgtgatatttgcggcaAGTTATTTACTTATAAAGGTAATCTCCACACCCACATCGAATCGATGCACAATGGTGTCGCCCACTGTTGTGATGTTTGCGGAAAATCATTTCCATATAAAATTAGTCTTAAAAATCACATCGATTTCATGCACAATGGAATCGaatatgcatgtgatatttgcggcaagaaattttcattaaaaagtaatcTCCAAATCCACATTGATTCGATGCACAATGGGACCaaacatgcatgtgatatttgcggcaAGACGTTTAAAAGAAAAGGTGAAATTACGAGGCACGTTCAATCAGCGCATAATGGTGTCACCCactcatgtgatatttgcggaaaggcATTCTCAACAAATTgttatctcaaaatccacatcgattcagTGCACAATGGGACCaaacatgcatgtgatatttgcggcaAGTCATTTACCCAAAAAGGTAATCTCCAAACCCACATCGAATCgatgcacaatggtgtcactcACTCATGCGATATTTGCGGCAAGTCATTTACCCAAAAAGGTAATCTCAAAATACACATCGATTCAGCGCACAATGGGATCAAACATACGTGCAGTACATGTGGAAAGACGTTTCCACATAAACGTAGTCTTcaaaaacacatcgattcaATTCACAATAGGACTaaacatgcatgtgatatattTGGCAAGAAATTTACACGAAAAGATTATCTCAAACCCCACATTGATAGAATACATAATGGTGTCACCCATTCATGCGGGACATGCGGAAAGACGTTCGGACAAAGAGCAAATCTCAAAGCTCACATCGCTATGGCTCATCGCTCTGCACGCATCATGacttaa
- Protein Sequence
- MKYSDDETRNAIKIETLDEVKKEIDLNFDCEFAEHNEKRSDQEDFNDKHRLEINIDSVHTGTKNTCNTCRKTFKKKGDLTRHVESVHNGVTHSCDICGKAFTQKYSLKLHIESIHIGVTHTCDICGKTFKRKGDITRHVQSVHNRVTRSCDVCGKSFPHKNSLKYHINSVHKKITHACNLCEKKFSTTTYLKIHIDSVHNGINQSCDICGKLFTYKGNLHTHIESMHNGVAHCCDVCGKSFPYKISLKNHIDFMHNGIEYACDICGKKFSLKSNLQIHIDSMHNGTKHACDICGKTFKRKGEITRHVQSAHNGVTHSCDICGKAFSTNCYLKIHIDSVHNGTKHACDICGKSFTQKGNLQTHIESMHNGVTHSCDICGKSFTQKGNLKIHIDSAHNGIKHTCSTCGKTFPHKRSLQKHIDSIHNRTKHACDIFGKKFTRKDYLKPHIDRIHNGVTHSCGTCGKTFGQRANLKAHIAMAHRSARIMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482804;
- 90% Identity
- iTF_01482804;
- 80% Identity
- iTF_01482804;