Tden020375.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000107.1:455069-456947[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.00015 0.029 15.2 1.2 12 43 169 197 162 198 0.85 2 12 0.19 37 5.2 0.7 18 43 203 225 199 226 0.75 3 12 0.11 21 6.0 0.4 18 41 231 251 229 254 0.72 4 12 0.29 57 4.6 0.6 19 43 260 281 255 282 0.74 5 12 0.25 49 4.8 1.2 18 43 315 337 304 338 0.85 6 12 1.2 2.5e+02 2.6 0.6 19 43 344 365 341 366 0.76 7 12 0.62 1.2e+02 3.6 4.5 16 44 369 394 357 394 0.86 8 12 0.22 42 5.0 2.5 18 43 399 421 396 422 0.83 9 12 0.016 3.2 8.6 0.5 18 43 427 449 423 450 0.77 10 12 0.00031 0.061 14.1 0.1 18 44 455 478 452 478 0.95 11 12 0.0017 0.34 11.7 1.9 19 43 485 506 482 507 0.95 12 12 8.1 1.6e+03 -0.0 0.5 17 43 509 532 508 533 0.76
Sequence Information
- Coding Sequence
- ATGGACTTCAGTGGTGTATATAACTGTAATGTCAGAGTGAAAAAGGAACCAAATGATGTTTTCCCAACTGAAAATGATGATTATGAGATAATTGGCAATGCAGACGATGTCAGAGTGAAGGAGGAACCAAATGATGATTTCCCgattgaaaatgaagattaTAAGATACTTGACAATGCAGACGATGCTAACACTGAAGAATCCTCGCGATGtcaagaaaattttactCATGGGCCTAAAGATATCGAAATAGAATTCGAATGTAAGGACGAAAAGTCAAGCATTGACTTATTAATAGTCAAAAAAATCGAGGACGATTATCCAGACCATTTGcagcatatgaaaaatattcacgaTTATCAGactcaaaagaaaattaaagaagaaattgTCGACGAAGTAAAAGAAGAATTGAATTCGGATGGTGAAATCAGTGATGCATTtgatgcaaatgaaaaaacattggCTCAAAATAGTCTATGCAAAACCCAAACTGATAAGGCACGCAATCGTAACAAATATTCATGTAATATATGCGGTAAAAAATTTGcacgaaaaaataatctcCAGGTCCACATCGATGCAGTTCATAATGGTGTTAAACATGCGTGTGGTATGTGTGGAAAGATATTCACACAAAAAGGAAcgctcaaaatccacatcgacaTGATGCATAATGGTATGACACCTACTTGTGAAatatgcggaaagaaattctcaaCTAATAATAAACTCAATATCCACATCGATTCAGTTCATAATGGTGTTAAGCATCCGTGTAGTATATGTAAAAAGACATTCTCACAAAAAGGAGATCTCAAAATGCACATCGATGCGATGCATAATGGTATGGCACCTACTTGCGCAATGTGTGGAAAGAAATTCTTAACTAAGGCTCAACTCAAGATTCACATCGATGGAGTACATAATGGTGTTAAACATGCGTGTGGTAtgtgtggaaagacattcacacaaaaaaattatctcaagATTCATATCGATTCAGAACATAATGGTGTTAGACATGCGTGTGGTACATgtgaaaagacattcacacaaaaatattatctcaAGACTCACATCGATGCGATGCATAATGATATGGCATATACTTGCGAAATGTGCGgtcaaaaatgtatacgaAAGAGTAATCTCAAGGTCCACATCGATTCAGTTCATAATGGTGTTAAACATGCGTGTGGTATGTGTGAAAAGACATTCTCACAAAAATCTCATCTCAAGACCCACATCGATGGAGTACATCATGGTGTTAAACATGCGTGTGGTAtatgtggaaagacattctCACAAAAAGGAACGctcaaaattcacatcgaTGCGATGCATAATGGTGTGGCACCTACTTGTGAAGTGTGTGGAAAGAAATTCGCATTGAAGAGTGGTCTCAAAAAGCACATGGAGTCAATGCATAATAATAAGATAACTCACCCGTGTGATACGTGCGGCAAGACATTTTCGCAAAAGCATCGTCTTATATCTCACATTAAAACGCAGCACGAAGACATCGCATGCGTTGTTTgcggagaaaaatttaaacatagGAAATATCTATACAGACACGTCAAAATTGTGCATGAGGGCAATACTCAAGCACGAGATCAATGCAAAAGATCATAG
- Protein Sequence
- MDFSGVYNCNVRVKKEPNDVFPTENDDYEIIGNADDVRVKEEPNDDFPIENEDYKILDNADDANTEESSRCQENFTHGPKDIEIEFECKDEKSSIDLLIVKKIEDDYPDHLQHMKNIHDYQTQKKIKEEIVDEVKEELNSDGEISDAFDANEKTLAQNSLCKTQTDKARNRNKYSCNICGKKFARKNNLQVHIDAVHNGVKHACGMCGKIFTQKGTLKIHIDMMHNGMTPTCEICGKKFSTNNKLNIHIDSVHNGVKHPCSICKKTFSQKGDLKMHIDAMHNGMAPTCAMCGKKFLTKAQLKIHIDGVHNGVKHACGMCGKTFTQKNYLKIHIDSEHNGVRHACGTCEKTFTQKYYLKTHIDAMHNDMAYTCEMCGQKCIRKSNLKVHIDSVHNGVKHACGMCEKTFSQKSHLKTHIDGVHHGVKHACGICGKTFSQKGTLKIHIDAMHNGVAPTCEVCGKKFALKSGLKKHMESMHNNKITHPCDTCGKTFSQKHRLISHIKTQHEDIACVVCGEKFKHRKYLYRHVKIVHEGNTQARDQCKRS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482833;
- 90% Identity
- iTF_01482833;
- 80% Identity
- iTF_01482833;