Tden017969.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000085.1:729315-730987[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 5.9 1.2e+03 0.4 0.9 33 44 157 168 150 168 0.82 2 13 2.3 4.4e+02 1.8 1.4 19 43 174 195 170 196 0.89 3 13 0.0006 0.12 13.2 0.3 19 44 202 224 199 224 0.95 4 13 0.83 1.6e+02 3.2 0.2 18 43 229 251 226 256 0.76 5 13 0.097 19 6.1 1.4 18 44 257 280 246 280 0.84 6 13 0.36 71 4.3 0.4 18 43 285 307 282 308 0.76 7 13 0.11 21 6.0 1.2 19 43 314 335 308 336 0.81 8 13 0.093 18 6.2 3.1 19 43 342 363 340 364 0.88 9 13 0.00013 0.026 15.3 1.7 18 44 369 392 367 392 0.95 10 13 1.1 2.2e+02 2.8 0.7 19 29 398 408 395 420 0.75 11 13 0.017 3.3 8.6 0.1 19 43 426 447 424 448 0.90 12 13 0.04 7.8 7.4 0.9 19 35 454 467 451 476 0.80 13 13 0.17 34 5.3 1.2 15 44 477 503 469 503 0.85
Sequence Information
- Coding Sequence
- ATGATATTTCCAGCGAGTAAGATGGAATCTGGTGATTTATTCAATTCTGCtataaaAGTGAAAGAAGAACCTCGTGATGAGCTTCTCAAtgataatgattataaaataactGACATACCACCTGCAGTTactaaaaatgtgaaattagAAAGGTTTTGGCaagaaaattcaacccAAGAGCTTCAAGAATGTGACGAAAATCAGGAAAATGAACTTGACGACATCCAAATCGAATTGGAATGTACAGATATGAAGCCCAATTTATTGGCTGtaacaaaaattgaagattattCTCCACATCAATGGGAGGATAGTGATGAGTATAAAACTggaagcaaaattaaattagaaacTGTCGGGACAGTGAAGAAAGAAATGTTAAGCGAAGAAGAAACTGATTTGAATTTCGGACGTGGACTCAgcaaacaaaataaacaagGAACTGTTTCCAAAGAGCTTAACTATGAACATAGGCTAAAAACTCACATTAATACTACGCATAATGGAATCAGACATGCATGTGACACTTGTGGAAAATCATTCAGATATAAGAGTCTTCTCCAAAGACACATCGATTCGTTACATCGTCAAATCACGCATccatgtgatatatgccaaaagacattctcagacaagagtaatctcaaaactcacatcgattcggtgcataatggtgccagttatgcatgcgatatttgcgaaaatgattttaaacgaAGGGGTGATCTCAAAACTCACGTCGATTCGGTGCATCATAAAATTACGAATCCTTGTAATAAATGCCCAAAGACATTCTCAGAAAAAGGTAGTctgaaaaaacacatcgaatcAATACATAATGGTGTTTCacatgaatgtgatatttgcggaaaagTGTTCAAACTAAGAGGTGATCTCAATAggcacatcgattcggtgcatcataaaataaggcatgcatgtgatatatgccaaaagacattctcagACAAGAGTAGTATAAAAAGACACACCGAAAGGGTGCATAACGGTGTTTTACATGCATGTCATGTTTGTGGAAAGACATACTCACAAAAAGGTAATCTCAAATCCCACACCGAATCGGTGCATAATGGTGTTTTACACGTATGCGATATATGCCGAAAGACATTCTCAGACAAGAGTAATCTTAGAAAGCACATCTATTCGGTGCACAAAGGTGTTagacatgcatgtgatatttgcgaaaagacattcacaACAAAGTATCATCTCCAAAACCATATCGACGCAGTGCACAATGGAATCGGCTTCGCATGTGACGTATGCGGAAAGAATTTCACACGTAAAAATGATCTCAAAAAGCATATGGATGCGGAGCACAATGGAATCACCCACGCATGTAAtttctgcgaaaaaaaatttaaatatcgaACTAGTCTCGCTAGACATAATAGATTGCCTCATAATGGTATACATTCATGCGAGACATGCGGAAAGACATTTGGACAGAAAAGAAATCTCAGAGCTCACATCGATGTGGCGCATCGCTCACTCAATATTGAcctaataaatgtttaa
- Protein Sequence
- MIFPASKMESGDLFNSAIKVKEEPRDELLNDNDYKITDIPPAVTKNVKLERFWQENSTQELQECDENQENELDDIQIELECTDMKPNLLAVTKIEDYSPHQWEDSDEYKTGSKIKLETVGTVKKEMLSEEETDLNFGRGLSKQNKQGTVSKELNYEHRLKTHINTTHNGIRHACDTCGKSFRYKSLLQRHIDSLHRQITHPCDICQKTFSDKSNLKTHIDSVHNGASYACDICENDFKRRGDLKTHVDSVHHKITNPCNKCPKTFSEKGSLKKHIESIHNGVSHECDICGKVFKLRGDLNRHIDSVHHKIRHACDICQKTFSDKSSIKRHTERVHNGVLHACHVCGKTYSQKGNLKSHTESVHNGVLHVCDICRKTFSDKSNLRKHIYSVHKGVRHACDICEKTFTTKYHLQNHIDAVHNGIGFACDVCGKNFTRKNDLKKHMDAEHNGITHACNFCEKKFKYRTSLARHNRLPHNGIHSCETCGKTFGQKRNLRAHIDVAHRSLNIDLINV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482848;
- 90% Identity
- iTF_01482848;
- 80% Identity
- iTF_01482848;