Tden001250.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000002.1:5100052-5101494[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.018 3.6 8.5 1.7 14 31 137 154 131 168 0.84 2 9 0.013 2.6 8.9 2.2 18 44 169 192 161 192 0.88 3 9 2.7 5.4e+02 1.5 1.5 17 43 196 219 194 224 0.80 4 9 0.0023 0.45 11.4 3.6 18 44 225 248 213 248 0.83 5 9 0.059 12 6.8 0.1 16 43 251 275 249 276 0.82 6 9 0.063 12 6.7 0.2 17 41 280 301 278 304 0.80 7 9 0.43 85 4.1 1.8 18 43 309 331 305 336 0.77 8 9 0.014 2.8 8.8 0.4 19 44 338 360 335 360 0.92 9 9 0.21 42 5.1 3.3 2 43 350 387 349 388 0.78
Sequence Information
- Coding Sequence
- ATGGAATCCAGTAATAGTCCAGTAATATCCAGTAATGTGtcgtttattgaaaatgatgatGAATTGAGTGACGAGAAACCTGATCTCAAAAACTTTCGGCTCTTACCGTTTTCACaagaaaattcaaCCCTTATCCTTCCAAAATGTcaagaaattcatgaaaataaacttgatGACGAAGTGGAAAtggttgttgaaaaaattaaaaATAGCAATCGTTCTGAATCTCAAAACAATATTGAAATAGAAACTACGGGGGAAGCGAAACAAGAATTTTCTGGTGGCGTCGCAGCAGATTTAGATTTGAATTTCGACCGTGCACTTGtcgaacaaaataaaaaaaggagaagtaCAAAACAATTGAACGATGAACGTAACCTCAAAACAAACATCGATAAGTTGCATAATGATAAAGCCCACACATGTGAAatatgcggaaagaaattgTCAACAAAGGGTAATCTGAAAGTCTACATTGAAACATTGCACAATGATGTCAGGCATACATgcgatatttgcggaaagaaattctcatCAAATAGTTATCTCAAAATACATATCAAAAGCACGCATAACGGTGACACTAATACATGCGATAGATGCGGAAAGATATTTCAAACCAAGGGAAGACTCAAATTTCACATCAATAAGTTGCATAACAAAATCACGCATGCATGTAATATTTGTGGAAAGAAATACTCATCAAAAAGTTATCTCAAAGTCCACATTgattcagtgcataatggtatcaaaaatgcatgtgatatatgcggaaaaatatttgcagagaggaGTTATCTCAAAACCCACATTGACGTAGTCCATAATGGTATCACAAATGAATGTGATGtgtgcggaaagaaatttgtcAGACAGGGAAATCTCAAAGTCCATATTAATGCGTTGCATTATGATGTCAGGcatacatgtgatatttgcaaaAACACCTTCACGACGAAGAATTATCTCAAAGTCCACATTGATTCAGTGCATAATTGTATCACTCATGCATGTGATgcatgcggaaagaaatttgcaTATAAGGctaatctcaaaaaacacatcaaTGAGTTGCATAGTAATGTCAAATATTCATGTGTTACATGTGAAAAGACATATACACAAAAAGGTTATCTCAAAACCCACATCGACTCAGTTCATAATGGTATCACATATGAATGCGATGTGTATGGAAAGAAATTCGGTACACGGTAG
- Protein Sequence
- MESSNSPVISSNVSFIENDDELSDEKPDLKNFRLLPFSQENSTLILPKCQEIHENKLDDEVEMVVEKIKNSNRSESQNNIEIETTGEAKQEFSGGVAADLDLNFDRALVEQNKKRRSTKQLNDERNLKTNIDKLHNDKAHTCEICGKKLSTKGNLKVYIETLHNDVRHTCDICGKKFSSNSYLKIHIKSTHNGDTNTCDRCGKIFQTKGRLKFHINKLHNKITHACNICGKKYSSKSYLKVHIDSVHNGIKNACDICGKIFAERSYLKTHIDVVHNGITNECDVCGKKFVRQGNLKVHINALHYDVRHTCDICKNTFTTKNYLKVHIDSVHNCITHACDACGKKFAYKANLKKHINELHSNVKYSCVTCEKTYTQKGYLKTHIDSVHNGITYECDVYGKKFGTR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482979;
- 90% Identity
- iTF_01482979;
- 80% Identity
- iTF_01482979;