Tden010767.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000036.1:1253622-1254994[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 3.8 7.4e+02 1.1 2.7 19 43 157 178 151 179 0.85 2 9 0.37 72 4.3 0.0 22 44 188 207 186 207 0.85 3 9 0.14 28 5.6 2.5 19 44 213 235 210 235 0.92 4 9 0.0017 0.33 11.8 0.5 18 43 240 262 237 263 0.94 5 9 0.0083 1.6 9.6 3.0 18 43 268 290 264 291 0.93 6 9 0.018 3.6 8.5 0.7 19 43 297 318 294 319 0.94 7 9 1.3 2.5e+02 2.6 0.4 19 43 325 346 322 347 0.81 8 9 0.00049 0.097 13.5 2.0 19 43 353 374 349 380 0.85 9 9 0.0011 0.22 12.3 1.7 18 44 380 403 376 403 0.94
Sequence Information
- Coding Sequence
- ATGGAATCCTACGATTTATTCAACGGTGCTGTTAGAATCAAAAAAGAGCCCGTGGACGAGTCATTTACAGTAAATGATGGGCATGCAGTGACTGAAAAGACATCCACTATCCACAACTTTCAGGCGTTAACAATTAAGCAAGAGAATTCGAATCACATGCTTCAAAAATGTGAAGAAAATCGTAGAATTGAACTTGACGATTTGTCAATTGAATTCGAATGCCAGGAAGACAAGCCCAAGTTTAATTCTTGGCTGAAAATTGAAgatagttttgaaaattattttcagaaaatgaGCAGAGATTGGACcgataaaaaagatattaaaaaagaaagtgagGTAGAAGTGAAGAAAGAATCTGTTGAAGATGACCCCGACAACTTGGTTACAAATGACGAGGGTGATTCACGTGGGCAAAAGAGATCGAGAACCAGCATTGATACGAGGCCTAAAGGTGTTACTTTTTCTTGTCATACATGTAAAAAGACATTTAGACACAAGATAAGTCTTAAACGACACATCGAATCAGGTCATGACGGTATCACCAACAGAAGTGATGTTTGCGGAAAGTCATTCGCTGATCAAAGcaatctcaaaaaacacatcgattcgatCCATAATGGCGTCACCCACGCATGTGATCAGTGTGGCaagatattcaaaaataaGAATCATCTCAAATCCCACATCGATTCAGTGCACAACAAAATAACTCATGAATGTGATCTGTGTGGAAAGATATACAGAAGAAAGCAGAATCTCAAAGTCCACATCGATTCAGTGCACGACAAAATAACTCATAAGTGTGATATATGCGGAAAGACGTTCCAATATAAGTCTGATCTCAAAAGACATGTCAATTCAATTCACCATGGTATCACAAACGGATGCGATATTTGCCAAAAGACGTTCTCACAAAAGAGCTATCTCAAGATCCACATAAATTCGAAGCATGGTGGCATCAGACATGCTTGCGATGTATGCGCAAAGAAATTCTCAACGAAGAATGAACTTAAAGACCACGTCGATGTAAAACATAATGGTGTCACATATGCATGTAATTTATGCGGAAAGAAATACGCACGAAAGAATAGCCTCAAAAGACACATTGACGGATTTCACAATCGTATCAATCATTCGTGTAATATATGTGGCAAGAAATTTTTGCGTAAGCGTAATCTCAATCAGCACGTCGAATCTTCGCATCCCAGTTACTAA
- Protein Sequence
- MESYDLFNGAVRIKKEPVDESFTVNDGHAVTEKTSTIHNFQALTIKQENSNHMLQKCEENRRIELDDLSIEFECQEDKPKFNSWLKIEDSFENYFQKMSRDWTDKKDIKKESEVEVKKESVEDDPDNLVTNDEGDSRGQKRSRTSIDTRPKGVTFSCHTCKKTFRHKISLKRHIESGHDGITNRSDVCGKSFADQSNLKKHIDSIHNGVTHACDQCGKIFKNKNHLKSHIDSVHNKITHECDLCGKIYRRKQNLKVHIDSVHDKITHKCDICGKTFQYKSDLKRHVNSIHHGITNGCDICQKTFSQKSYLKIHINSKHGGIRHACDVCAKKFSTKNELKDHVDVKHNGVTYACNLCGKKYARKNSLKRHIDGFHNRINHSCNICGKKFLRKRNLNQHVESSHPSY
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482959;
- 90% Identity
- iTF_01482959;
- 80% Identity
- iTF_01482959;