Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000056.1:403508-404823[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.45 88 4.0 3.9 18 43 161 183 150 188 0.76

2 8 0.22 43 5.0 2.0 18 39 189 207 185 216 0.74

3 8 0.084 16 6.3 0.4 19 44 218 240 212 240 0.93

4 8 0.027 5.2 7.9 0.5 19 43 246 267 243 268 0.93

5 8 0.00063 0.12 13.2 0.8 18 44 273 296 271 296 0.92

6 8 0.0007 0.14 13.0 2.4 16 44 299 324 292 324 0.87

7 8 0.00024 0.047 14.5 4.8 1 44 313 352 313 352 0.94

8 8 0.36 71 4.3 1.4 15 43 354 379 352 380 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.45	88	4.0	3.9	18	43	161	183	150	188	0.76
2	8	0.22	43	5.0	2.0	18	39	189	207	185	216	0.74
3	8	0.084	16	6.3	0.4	19	44	218	240	212	240	0.93
4	8	0.027	5.2	7.9	0.5	19	43	246	267	243	268	0.93
5	8	0.00063	0.12	13.2	0.8	18	44	273	296	271	296	0.92
6	8	0.0007	0.14	13.0	2.4	16	44	299	324	292	324	0.87
7	8	0.00024	0.047	14.5	4.8	1	44	313	352	313	352	0.94
8	8	0.36	71	4.3	1.4	15	43	354	379	352	380	0.77

Sequence Information

Coding Sequence: ATGGTATCAGTTACTACATTGAATTGCGCTGTTAAAGTGAAGGAGGAACCTTGCGATTTGTCGCTAActgaaaataatgatgaaataattgaCAAGACACCagatttcaaaacttttcaattttctaaaaattttcaagataatcCAACACCTATCCTTCAAAAATGTGTCGGAAATCATGAAAGGGTACTTACTGATGAcgtgaaaatcgaatttgagTGTGAATGGGCACAACCTAACTtggtactaaaaaaaattgacgattaTTCGCAAAGCCAATGGCAGGATATGAAGAGTGGCTGCAATTATGAAACTCAAAATAAACTCAAAGTGGAAACAGAAGGGATTGTtaaaaaagagtttttcaaCGATGAAGCAACCAAATTACATTTTGACTCTGAACTCAGCGaacagaatgaaaaaagaaatttaaccAAAGAGTTTGGTCATAAACATAAAGGCATAACCCACATAGACACGACGTGTGGTATTTgcgaaaagacattcacacaaaaatgccatctcaaaatccacatcgattcggtgcacaatggtgtcacccATAAGTGCGGCATCTGCAAAAAGGCATTCACACAAAAATCCTATCTCAAAACCCACACCGATTCAGTGCACAATCGAATCACCCactcatgtgatatttgtgcaAAGAGATTTTCAGTAAAAAGTAATCTCAATGTCCACGTCAATACCGTACACAATAAAATCACCCGctcatgcgataagtgcggaAAGGCATTCACAACAAAGTcaaatctcaaaatccacatcaaTGCGGTGCACGAAGGTGTCGAACATGTATGTGATgtgtgtgaaaagaaattctcatctaagagtaatctcaaaaaacacatttatGCGATACACAAAGGTGTCAAACATGTATGTGATgtgtgtgaaaagaaattctcatctaagagtaatctcaaaaaacacatttatGCGATACACAAAGGTGTCAAACATGTATGTGATgtgtgtgaaaagaaattatcATCTAAGAGTagtctcaaaaaacacattgatACGGTGCATAATGCtactaaatatatatgtgatatttgcggaaagatgTTCGCTCACAAGTTCAGTCTAAAAGCTCATGTCAATATGGCACATCGCTCACGCATTATGACCtag
Protein Sequence: MVSVTTLNCAVKVKEEPCDLSLTENNDEIIDKTPDFKTFQFSKNFQDNPTPILQKCVGNHERVLTDDVKIEFECEWAQPNLVLKKIDDYSQSQWQDMKSGCNYETQNKLKVETEGIVKKEFFNDEATKLHFDSELSEQNEKRNLTKEFGHKHKGITHIDTTCGICEKTFTQKCHLKIHIDSVHNGVTHKCGICKKAFTQKSYLKTHTDSVHNRITHSCDICAKRFSVKSNLNVHVNTVHNKITRSCDKCGKAFTTKSNLKIHINAVHEGVEHVCDVCEKKFSSKSNLKKHIYAIHKGVKHVCDVCEKKFSSKSNLKKHIYAIHKGVKHVCDVCEKKLSSKSSLKKHIDTVHNATKYICDICGKMFAHKFSLKAHVNMAHRSRIMT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482966;
90% Identity: iTF_01482966;
80% Identity: iTF_01482966;