Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000006.1:2539831-2541592[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.8 3.6e+02 2.1 2.6 28 44 150 167 145 167 0.77

2 14 0.13 26 5.7 6.6 18 43 172 194 168 195 0.92

3 14 0.00034 0.067 14.0 1.7 16 44 198 223 195 223 0.92

4 14 0.00036 0.071 13.9 3.4 18 44 228 251 226 251 0.95

5 14 0.0034 0.68 10.8 2.2 19 44 257 279 255 279 0.95

6 14 0.94 1.8e+02 3.0 5.4 18 43 284 306 282 307 0.92

7 14 0.011 2.2 9.2 0.5 19 44 313 335 310 335 0.93

8 14 0.19 38 5.2 1.6 18 43 340 362 338 363 0.93

9 14 0.0023 0.45 11.4 1.9 18 44 368 391 366 391 0.94

10 14 0.0011 0.22 12.3 4.5 18 44 396 419 394 419 0.95

11 14 0.22 43 5.0 3.1 19 43 425 446 423 447 0.79

12 14 0.22 44 5.0 0.6 19 38 453 469 450 479 0.72

13 14 0.51 1e+02 3.8 1.3 18 43 480 502 469 503 0.80

14 14 0.25 48 4.8 2.3 19 36 509 523 506 531 0.76

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.8	3.6e+02	2.1	2.6	28	44	150	167	145	167	0.77
2	14	0.13	26	5.7	6.6	18	43	172	194	168	195	0.92
3	14	0.00034	0.067	14.0	1.7	16	44	198	223	195	223	0.92
4	14	0.00036	0.071	13.9	3.4	18	44	228	251	226	251	0.95
5	14	0.0034	0.68	10.8	2.2	19	44	257	279	255	279	0.95
6	14	0.94	1.8e+02	3.0	5.4	18	43	284	306	282	307	0.92
7	14	0.011	2.2	9.2	0.5	19	44	313	335	310	335	0.93
8	14	0.19	38	5.2	1.6	18	43	340	362	338	363	0.93
9	14	0.0023	0.45	11.4	1.9	18	44	368	391	366	391	0.94
10	14	0.0011	0.22	12.3	4.5	18	44	396	419	394	419	0.95
11	14	0.22	43	5.0	3.1	19	43	425	446	423	447	0.79
12	14	0.22	44	5.0	0.6	19	38	453	469	450	479	0.72
13	14	0.51	1e+02	3.8	1.3	18	43	480	502	469	503	0.80
14	14	0.25	48	4.8	2.3	19	36	509	523	506	531	0.76

Sequence Information

Coding Sequence: ATGGAGTTCGGTGATACACTTAATTGCGCAGtcagAATTAAAGAGGAGCCAAGCGATGTGCGGCCGTCTATAGAAAATAATCGTGAAGCGATTGACGAGAAACCCGATCTAAAAAACGTCCAGCTATCATCATTTCCACGAGAAAATTTGaCCTATACCCTTCGAAAGTGTGAAGAAAATCATGAAATTAAACTTAATGACGAAGTGGAAATAATTGTTGAATGTGAAGACGTCAAGCACAACACGGATTTATTAGCAATTAAGAAAATGGATGATTATACTACTAATCACTTGAGGAATTTAAAAGATAGCGATGGttgtgaaattaaaattaaaatagaaaccATAGAAGATGTAAAACCGAAATGTTTCAGTGTCGATGCACAAGAaccgaatttgaattttgtccATGAACTTGtcgatcaaaataaaaaaaggagaataacaaaaaagttgACCAacgaacataacctcaaaacccACATGAGTACGGTGCATAGTGGTGCAGTCCATACATGCAAAAAATGTGGAAAGACATTTAAACACAAGAGTCATCTGAATAGGCATGTTGAATCAATGCATGATGGTGTTAAACATACATGCAATACGTGTGGAAAGTCATTCACtcaaaaaagtaatctcaaaactcacatcggTACtgcgcacaatggtgtcacacatacatgcaaTACGTGTGGAAAGTCATTCACTCGaaaaagtaatctcaaaactcacattgGTACtgcgcacaatggtgtcactcacgcatgtgatatttgtagaaagaaattttcaagcaagagtaatctcaaaatccacatcggtactgcgcacaatggtgtcacacatACGTGCATTAAATGCGGAAAGACGTTTAAATGCAAGAGTTATCTGAATAGGCATGTTAAATCAACGCATGATGGTGTTACATATGCATGCAATACGTGTGAAAAGAAGTTTacgcaaaaagaaaatctcaaaattcacatcgatactgtgcacaatggtgtcaggCAAACATGTATGACATGTGGAATGACGTTTCAACGCAAGAGTCATCTGGATAGGCATGTTAAATCAACGCATGATGGTgtcacacatacatgcaaTACGTGTGGAAAGTCATTCACTCAAGaaagtaatctcaaaactcacatcggTACtgcgcacaatggtgtcactcacacatgtgatatttgtagaaagaaattttcaagcaagagtaatctcaaaatccacatgaATGAGAAGCACAAAGGTATCACTCATGCATGTCATATTTGCGGCAAGACATTCAATCGAAAAGGTTATCttaaaatccacatcgattcgatgCACAACGGTGTCACTCATGCATGTGACatatgcggaaaaaaatttacgagtaAGGgttatctcaaaatccacatcgattcggtgcacaaCGGTGTTAAACATTCATGTGATATCTGCGGAAAGTCatttactcaaaaaattaatctccAAACTCACATAGATATGGTGCATACAGGTGTCActcatgcatgtgatatttgcggcaagacattcaaacgaaaaaattatcttaaaaaacACAAGTATAAGGTGCACAATGAATTAATCCACTGA
Protein Sequence: MEFGDTLNCAVRIKEEPSDVRPSIENNREAIDEKPDLKNVQLSSFPRENLTYTLRKCEENHEIKLNDEVEIIVECEDVKHNTDLLAIKKMDDYTTNHLRNLKDSDGCEIKIKIETIEDVKPKCFSVDAQEPNLNFVHELVDQNKKRRITKKLTNEHNLKTHMSTVHSGAVHTCKKCGKTFKHKSHLNRHVESMHDGVKHTCNTCGKSFTQKSNLKTHIGTAHNGVTHTCNTCGKSFTRKSNLKTHIGTAHNGVTHACDICRKKFSSKSNLKIHIGTAHNGVTHTCIKCGKTFKCKSYLNRHVKSTHDGVTYACNTCEKKFTQKENLKIHIDTVHNGVRQTCMTCGMTFQRKSHLDRHVKSTHDGVTHTCNTCGKSFTQESNLKTHIGTAHNGVTHTCDICRKKFSSKSNLKIHMNEKHKGITHACHICGKTFNRKGYLKIHIDSMHNGVTHACDICGKKFTSKGYLKIHIDSVHNGVKHSCDICGKSFTQKINLQTHIDMVHTGVTHACDICGKTFKRKNYLKKHKYKVHNELIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482822;
90% Identity: iTF_01482822;
80% Identity: iTF_01482822;