Tden020440.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000108.1:509256-510548[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 8 1.5 3e+02 2.3 0.1 34 44 169 179 155 179 0.78 2 8 0.045 8.9 7.2 6.5 2 44 169 207 168 207 0.88 3 8 0.0003 0.059 14.2 1.0 18 44 212 235 209 235 0.88 4 8 0.0019 0.37 11.6 0.5 18 43 240 262 237 263 0.88 5 8 0.25 50 4.8 0.3 18 44 268 291 266 291 0.88 6 8 0.0073 1.4 9.7 0.2 18 43 296 318 292 319 0.91 7 8 0.016 3.2 8.6 0.4 19 43 325 346 323 347 0.89 8 8 0.5 99 3.9 1.0 19 44 353 375 350 375 0.89
Sequence Information
- Coding Sequence
- ATGGAATCGAGTGATACAGTTAATTCTGCTGTTAGAATCAAAAAAGAACCCATTGATGAGTGGCTTACTGAAAATGATGGTGGTAATATAATTGACTCGGCGCCCGATGTCAAAAATCAACTCTTCGGATTACCGCCAAACGATTCAgtGCTTCGAGAATGTCatgaaaatcgcgaaaatgaatttgatgaCTTGCATATTGAATTGGAGTGTAAAGATGTAAAGCTTATTATGAATTCAATAGTAAATAAGAAAACTGACGAATATTCTCAATATCCCTCGCAGAATATGAAATATAGTGACGATTACACCATTGAAAACAGAATTAAAATAGAAACCGTGGACAGCGTGAAAAAAGAGATCGATTTGAATTTCGATTGTGAACTCCGCGATCAAAGAGGTAATCTCAAAACTAACATCAGTGCGATGCACAATGGTACCCAAAATCCATGCAGTACACGTGAAAAGACATTTTTACGAAAAGATCATCGTAAAACCCGCATCAATCTGAAACAACATGTTGATACGGCGCACAAAAGTGTCAGACATACGTGCAATACATGTGCaaagacattcacacaaaGCAGTCATCTTAAAACCCACATCGATTCGATACACAATGGTGTCAAATattcatgtgatatttgcggaaagacatATTCAAACAGGGGTactctcaaaaaacacatcaaTTCGGTTCATAATGGTGTCAAACATGCATGTGACATATGTGGCaagaaattttcacgaaaagaTAATCTCAAACTCCACATCGATGCGGTGCATAATGGTATCGCACCTACATGTGGTAGATGCGGTAAGTCGTATTCTCTAAAATCGTATCTCAAAATCCATAtcgattcagtgcataatggTGTCAAACATGCATGTGACATATGTGGCAAGAAATTTCCACGCAAAAATGTTCTCAAAGCCCATATCGATTCGATGCACGAAGGTATCACTCACGCATGTGAAttatgtggaaaaaaatttaaatatccaTCCGGTCTCAGAAACCATGTCAAATTGTCGCATGATGGTATCACCCATTCATGCGAGACATGCGGAAAGACGTTCGGACAAAGAGCAAATCTCAAAGCTCACATCGCTATGGCGCACCGCTCTGCACGCGTTGACAAATAA
- Protein Sequence
- MESSDTVNSAVRIKKEPIDEWLTENDGGNIIDSAPDVKNQLFGLPPNDSVLRECHENRENEFDDLHIELECKDVKLIMNSIVNKKTDEYSQYPSQNMKYSDDYTIENRIKIETVDSVKKEIDLNFDCELRDQRGNLKTNISAMHNGTQNPCSTREKTFLRKDHRKTRINLKQHVDTAHKSVRHTCNTCAKTFTQSSHLKTHIDSIHNGVKYSCDICGKTYSNRGTLKKHINSVHNGVKHACDICGKKFSRKDNLKLHIDAVHNGIAPTCGRCGKSYSLKSYLKIHIDSVHNGVKHACDICGKKFPRKNVLKAHIDSMHEGITHACELCGKKFKYPSGLRNHVKLSHDGITHSCETCGKTFGQRANLKAHIAMAHRSARVDK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483032;
- 90% Identity
- iTF_01483032;
- 80% Identity
- iTF_01483032;