Tden013230.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000050.1:497477-498899[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.0098 1.9 9.3 5.1 18 43 170 192 163 193 0.92 2 9 0.025 4.9 8.0 0.2 19 40 199 217 196 221 0.91 3 9 0.00046 0.091 13.6 1.4 1 43 210 248 210 249 0.87 4 9 0.00049 0.096 13.5 1.2 19 44 255 277 252 277 0.93 5 9 0.31 60 4.5 1.9 19 39 283 300 280 309 0.76 6 9 1.8 3.6e+02 2.1 3.0 18 29 310 321 304 333 0.78 7 9 0.012 2.3 9.1 0.9 18 44 338 361 327 361 0.91 8 9 0.0009 0.18 12.6 0.6 18 43 366 388 363 389 0.92 9 9 2.1 4.2e+02 1.8 0.6 19 41 395 414 393 417 0.78
Sequence Information
- Coding Sequence
- ATGGAATCCAATGATATACTCAATTCTACTGtcagAGTGAACGACGAGCCTAGCATTACTGGAAATAATTGCGAGATGATGGACAAGAAACCTGATCTGAAAAACTTCCAACTCTCACCAATTGTGCAAGAAAATTCTaCTCATATCCTTTCAAAGTGTGACCTTGAACTTGGAAATGAATTTGACAACGAAGTGGAAATAGTCGTTGAATGTGAGGACATGAAACCAAATGTGGATTCATTAATAGTTCACAAAGTATATGATAATTCTCAAAATCACTTGAGCAATGTGATAGATAGCGATGGTGATAAAGttcaaaatacaattaaaatagATCCCCTGGAGGAAATAAAACAAGAAATTTTTGGTGACGTTGCAGCAGGACTGAACTGGAATTTAGACAGTGATCTAGTCAAACGAAATAGAAAAAGCAGAATTACAAAAAAGTGTAACAGCGAACACAGACccaaaaaactaattatttcaGTGCATAATGATATGAGCCAAGCATGTAAAATATGTAGGAAGAAATTTTCTCATAAGAGTAGTCTAAGTAGGCATGTCAAATCATTTCATCACTGTATTACTTACTCATGTGATGTATGCAGCAAGACATTATCACTAAAAAGTAATCTCAAACAGCACATAGATTCGGTGCCTAATGGTGTCATCCAATCATGTAATATTTGtggaaaatcattttcatccaCAAGATATCTCGAAAACCACATGAATGtggtgcacaatggtgtcacccTCTCATGTAATATCTGCGGAAAATCATTTACTCGAAGAAGTAGTCTTAAAAAGCACATCGATTCAGTGCACAATAGGATTACCCACTCATGTgacatttgtaaaaaatcattttcatccaaaaattacatcaaaaacCACATAAATGCGGTTCACAATGGTATCAAACATGCGTGCAATAcatgtggaaaaaaattcacaacaAAAAGTGATCGCAAAATACACATCGATTCGGCGCACAATGGTGTAAAACATGCATGCGATAAATGTGGAAGGAGGTTCgcacaaaaaagtaatctcaAAGCCCACATCGATTCcgtgcacaatggtgtcaaacatgcatgtgatatttgtggcAAGACGTTTACAAGTAAGGGTAATCTGACGAAGCACGTTCAATCAGCGCATATTGGTGTCACCCACTCATGTGATAGTTGCGGCAAGTCATTTACTCAGAAAAGTAGTCTCAAAACCCACGTCGATTTGGTACATTCGTCACGAATCACAACTTGA
- Protein Sequence
- MESNDILNSTVRVNDEPSITGNNCEMMDKKPDLKNFQLSPIVQENSTHILSKCDLELGNEFDNEVEIVVECEDMKPNVDSLIVHKVYDNSQNHLSNVIDSDGDKVQNTIKIDPLEEIKQEIFGDVAAGLNWNLDSDLVKRNRKSRITKKCNSEHRPKKLIISVHNDMSQACKICRKKFSHKSSLSRHVKSFHHCITYSCDVCSKTLSLKSNLKQHIDSVPNGVIQSCNICGKSFSSTRYLENHMNVVHNGVTLSCNICGKSFTRRSSLKKHIDSVHNRITHSCDICKKSFSSKNYIKNHINAVHNGIKHACNTCGKKFTTKSDRKIHIDSAHNGVKHACDKCGRRFAQKSNLKAHIDSVHNGVKHACDICGKTFTSKGNLTKHVQSAHIGVTHSCDSCGKSFTQKSSLKTHVDLVHSSRITT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482922;
- 90% Identity
- iTF_01482922;
- 80% Identity
- iTF_01482922;