Tden027687.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000290.1:10888-12387[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 10 0.0058 1.1 10.1 1.4 17 43 170 193 164 194 0.90 2 10 0.23 45 5.0 0.3 18 29 199 210 197 222 0.86 3 10 0.034 6.6 7.6 1.0 18 43 227 249 212 250 0.87 4 10 0.055 11 6.9 1.1 18 43 255 277 252 278 0.93 5 10 0.0078 1.5 9.6 2.3 18 43 283 305 279 306 0.78 6 10 0.013 2.5 8.9 2.2 16 44 309 334 297 334 0.85 7 10 7.8 1.5e+03 0.0 0.4 19 43 340 361 338 362 0.72 8 10 0.00015 0.03 15.1 2.2 5 43 355 389 351 390 0.79 9 10 0.082 16 6.4 0.6 19 43 396 417 393 422 0.84 10 10 0.098 19 6.1 2.6 18 43 423 445 420 449 0.73
Sequence Information
- Coding Sequence
- ATGGAATCGAGGGCCATATACAACTGTGCCGTTAGagTAAAAGAGGAACCTCGTGATGTGCCCTTTACTGAAGacataaattcaataattgacAACACACCCGATACCAAACATTTTCTGAACTTGAGGTTTCTGCGAGAAAATCCcGCTTACATATCACAAGAACGTCGCGACAATCACGAATGTGAACCCAGTGAAAATATGGAAGTAGTTTTTGAGTGTAAAGATGCAAAGCCGaacattaatttattgacAGTTAAAAAAGTTGACGATGATTCTCCGAATTACTCGCAGAATATAAGAAATAGCGATGATTATAAAGTGCAAAACATAATCAAAACAGAAACAGTGCGAGAAGTAAAGAAAGGAATTTTCGATGCAgaagaatcaaattttaattttgatccTGAGTCAGGcttgcaaaatgaaaaaagaagaattaccAAAAAGTCTAATTATGAAGATGGACTAAAAACCCTATTGGATACGGTGaataataacataatttttacatgtgatatttgcaagaaaaaattctcaaataaTAGTCATCTTAAAACTCACATTGACTCGGTGCATCTTAAAATAACCCATGAATGTGATGTTTGCGGCAAGACGTTTACACGAAAAGGTTATCTCAAAATACACATTGACGCGATTCACAAGGGTGTCTCTCAATCATGCGACGTTTGCGGAAAAATATTCCGATACATGCATGATCTCAAAAGACATATGAATGTAGCGCATACAGGTATCAACCACACTTGTGAAACATGTGGAAAGTCATTTATGTATAAAGATAGTCTCAAACGCCACATCAATTCGGTGCATGATAAAATCATTCatgaatgtaatatttgtGAAAAGAAGTACTCACAAAAGAATGATCTCAAGAAACACACCGATTCAGTTCATAATGGTGTCAAACATGTATGTGATGTTTGTGGAAAGATATTTAAATGGAAGACTAATCTTAAAGTCCATATCAATGCATTTCACAATGGTATCACTCATGCGTGTGATATATGCgacaagaaatttttattaaataagtaTCTCAAACAACACATAGATGAggtgcataataaaattacatatacTTGTAATTTGTGTGGTGAAatatttgaacgaaaaaataatctgAGAAGGCACGTCCAAGCGTTACATAGTAATATTACATACGCATGTCGGACATGTGGAAAAACATTCGGACGAAAAGATTATCTGAAAGCCCACATACAGGCGGTACATAACTGTATAACCCATCGATGTGATGTTtgcggaaaaatattttcatacaaatGTAGTCTCAATAGTCACGTTAGATCAACGCATATTGGTAGAGCCTAA
- Protein Sequence
- MESRAIYNCAVRVKEEPRDVPFTEDINSIIDNTPDTKHFLNLRFLRENPAYISQERRDNHECEPSENMEVVFECKDAKPNINLLTVKKVDDDSPNYSQNIRNSDDYKVQNIIKTETVREVKKGIFDAEESNFNFDPESGLQNEKRRITKKSNYEDGLKTLLDTVNNNIIFTCDICKKKFSNNSHLKTHIDSVHLKITHECDVCGKTFTRKGYLKIHIDAIHKGVSQSCDVCGKIFRYMHDLKRHMNVAHTGINHTCETCGKSFMYKDSLKRHINSVHDKIIHECNICEKKYSQKNDLKKHTDSVHNGVKHVCDVCGKIFKWKTNLKVHINAFHNGITHACDICDKKFLLNKYLKQHIDEVHNKITYTCNLCGEIFERKNNLRRHVQALHSNITYACRTCGKTFGRKDYLKAHIQAVHNCITHRCDVCGKIFSYKCSLNSHVRSTHIGRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482916;
- 90% Identity
- iTF_01482916;
- 80% Identity
- iTF_01482916;