Tden013215.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000050.1:430852-432586[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.0011 0.22 12.4 3.9 12 44 155 184 144 184 0.84 2 13 1.1 2.2e+02 2.8 1.2 19 35 190 203 187 212 0.74 3 13 0.093 18 6.2 1.6 18 43 217 239 215 240 0.80 4 13 0.012 2.3 9.1 0.6 1 44 229 268 229 268 0.84 5 13 0.056 11 6.9 0.7 19 44 274 296 272 296 0.90 6 13 0.3 59 4.6 0.2 19 44 302 324 299 324 0.85 7 13 0.014 2.7 8.8 3.0 18 44 329 352 327 352 0.90 8 13 1.1 2.1e+02 2.8 0.2 19 39 358 375 356 380 0.72 9 13 0.34 67 4.4 1.6 5 30 373 404 369 412 0.66 10 13 0.58 1.1e+02 3.7 1.6 19 44 414 436 411 436 0.88 11 13 0.0015 0.3 11.9 0.4 19 44 442 464 440 464 0.95 12 13 0.0011 0.22 12.3 0.2 14 44 465 492 464 492 0.88 13 13 0.16 32 5.4 0.5 15 44 494 520 492 520 0.83
Sequence Information
- Coding Sequence
- ATGAGTAAGATGAAATCCAGTGGTCTCTTCAACTGTGCCATCagGGTGAAAAACGAACCCTGTGACACGTCTCTTATTGAGAATGATGACAATGGGATCGATGAGGCGCCTGATGTTAAAAATTTCCGATTCTCCGGGGAATATTCCAATTTTCAAGAGTGTGAcaaaaatcacgaaaatgaATTGAACGAGATGCAAATTTTGTTTGAGTGCAAAGACGTCAAGCTTATTATGAATTCATTAGTAAATAAGAAAACTGACGATTATTCACCAAATTACTTGCAGAATATGAAATATAGCGACGACGAAACTcgaaatgtaattaaaatagaaactcTGGACGAagtcaaaaaagaaatagattTGAATTTCGATTGTGAATTTGCCGAGCACAATGAAAAGAGAAGCGATCAAGAAGATTTCAACGATAAACATAGACTCGAAATAAACATCGATTCTGTGCGTACGGGTACCAAAAATACCTGCAATACATGCAGAAAGACGTTTAAAAGGAAGTGTGATCTGACGAGGCATGTTGAATCAGTGCATAATGGTGTCACCCactcatgtgatatttgcggcaAGGCATTTTCTCATAAATATAGTCTCAAACTCCACATCGAATCGATACACATTGGTGTCACGCATACATGTGATGTATGCGGAAAGACGTATAAAGGAAAGAGTGAAGTGTATAAGCACGTTCAATCAGTACATAATGGTGTCACCTACTCATGTGATGTTTGCGGAAAGGCATTTACTCAGAAAGGTagtctcaaaatccacatcgaatcgatgcacaatggtgtcactcgctcatgtgatatttgcggcaAGACGTTTACATGGAAGTGTGATCTGACGAGGCATGTTCAATCAGCGCATAATGGTGTCACCTACTCATGTGATGTTTGCGGAAAGGCATTTACTCAAAAAGGTagtctcaaaatccacatcgaatcgatgcacaatggtgtcacgcATACATGTAATATATGCGGCAAGTCATTTACTCAGAAAATTAGTCTCAAAACCCACATCGAATCgatgcacaatggtgtcactcactcatgtgatatttgcggaaaatcATTTCCACGTAAAATTAGTCTTAAAAATCACATCGATTTCGTGCACAATGGAATCAAATATGCATgcgatatttgcggaaaggcATTTACTCAAAAATATAGTCTCAAACTCCACATCGATTCAATTCACAATGGGATTTCTCactcatgtgatatttgcggcaTGATATTTACACATAAGAGAAATGtcaaaactcacatcgatTCGATGCACAATGGGATTACCCATTCATGTGGTATTTGCGGCAAGacattttcattgataaataatcttaaaataCACTTTGTTTCGATGCATAAACGTACCTCTCAAGCATGTGACtattgtggaaaaaaatttaaatatccaTCAGATCTCAGAAAGCATGTCAAATCGTCGCATAATGGCACAATCCATACATGCGGGGTATGCGGAAAGACATTCGGACTAAGAGGAAATCTCAAAGCTCACATCGACATGGCGCATCGCTCCCGCATTGTgacttga
- Protein Sequence
- MSKMKSSGLFNCAIRVKNEPCDTSLIENDDNGIDEAPDVKNFRFSGEYSNFQECDKNHENELNEMQILFECKDVKLIMNSLVNKKTDDYSPNYLQNMKYSDDETRNVIKIETLDEVKKEIDLNFDCEFAEHNEKRSDQEDFNDKHRLEINIDSVRTGTKNTCNTCRKTFKRKCDLTRHVESVHNGVTHSCDICGKAFSHKYSLKLHIESIHIGVTHTCDVCGKTYKGKSEVYKHVQSVHNGVTYSCDVCGKAFTQKGSLKIHIESMHNGVTRSCDICGKTFTWKCDLTRHVQSAHNGVTYSCDVCGKAFTQKGSLKIHIESMHNGVTHTCNICGKSFTQKISLKTHIESMHNGVTHSCDICGKSFPRKISLKNHIDFVHNGIKYACDICGKAFTQKYSLKLHIDSIHNGISHSCDICGMIFTHKRNVKTHIDSMHNGITHSCGICGKTFSLINNLKIHFVSMHKRTSQACDYCGKKFKYPSDLRKHVKSSHNGTIHTCGVCGKTFGLRGNLKAHIDMAHRSRIVT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482827;
- 90% Identity
- iTF_01482827;
- 80% Identity
- iTF_01482827;