Tden003537.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000006.1:2414408-2415767[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 5 9.9e+02 0.6 3.2 33 44 158 169 147 169 0.81 2 9 0.038 7.4 7.5 1.5 18 43 174 196 170 197 0.85 3 9 0.0057 1.1 10.1 0.9 19 44 203 225 200 225 0.93 4 9 0.00022 0.044 14.6 2.5 18 44 230 253 228 253 0.95 5 9 0.016 3.1 8.7 1.2 19 44 259 281 257 281 0.92 6 9 0.04 7.9 7.4 2.3 18 44 286 309 284 309 0.93 7 9 0.00093 0.18 12.6 1.2 19 44 315 337 313 337 0.95 8 9 0.0036 0.71 10.7 0.2 18 43 342 364 339 365 0.94 9 9 0.068 13 6.6 0.2 18 39 370 388 366 393 0.73
Sequence Information
- Coding Sequence
- ATGGAATCCAGTGGTTTTTTCAATGGTGCTATCAGAGTAAAAGAGGAGCCTGCTACTGATGTACCacttattgaaaatgaagGTGAAACGACTGACGAGAAACCTGATTTGAAAAACTTCCGACTCTTACAATTTCTGCGAGAAAATTCGGCCGATACACTTCCAAAATGTGATATGAAACTTGAAAGTAAACTTGATGACGAAGTGGAAATAGTTGTTGAATGTGAAGACGTCAAGCCCAACAaggatttattaaaaaataaaaaaattgaccattATAGCCCTAATCACTCGAGGAatgtaaaagacattcacggttatgaaactaaaaatgtaattaaaatagaaaccGCAGACGGGATGAAACACGAATTTGTTGGTTACAATGCACAAGAaccgaatttgaattttgtccATGAACTTgtcaatcaaaataaaaaaaggagaataacaaaaaagttgacccatgaacataacctcaaaacccACATGAGTACGGTGCATAGTGGGGCAGTCCATGTATGCAAAACATGCGGAAAGACGTTTAAACAAAAGAGTCATCTAAATAATCATGTTGAATCAACGCATGATGGTGTCACTCactcatgtgatatttgcgaaAAGACGTTTACTCAAAAAAGTagtctcaaaactcacatcgatactgtgcacaatggtgtcacacatacatgcaaTACGTGTGGAAAGTCATTCACtcaaaaaagtaatctcaaaactcaTATGGATACtgcgcacaatggtgtcactcactcatgtgatatttgcgaaAAGACGTTTACTCAAAAAAGTagtctcaaaactcacatcggtactgtgcacaatggtgtcacacatacatgcaaTACGTGTGGAAAGTCATTCACTCAAAAAAGttatctcaaaactcacatcggTACtgcgcacaatggtgtcactcacgcatgtgatatttgtagaaagaaattttcaagcaAGAGTAATCTCATAATCCACATCGATACTGTGCACAATAGTGTCAGGCAGAAATGTGATGTATGTGGAAAGAAATTCACAAGTAAGAGTTATCTCAAAACCCATATCATTTCGGCGCACGATGGTGTTaaacatgcatgtgatatttgcggcaAGACATTCAAAGGAAAAGATACTCTTCAAATCCATGTGGATTCGGTTCAtaaaaagatttcgcatgcatGCAATTTATGA
- Protein Sequence
- MESSGFFNGAIRVKEEPATDVPLIENEGETTDEKPDLKNFRLLQFLRENSADTLPKCDMKLESKLDDEVEIVVECEDVKPNKDLLKNKKIDHYSPNHSRNVKDIHGYETKNVIKIETADGMKHEFVGYNAQEPNLNFVHELVNQNKKRRITKKLTHEHNLKTHMSTVHSGAVHVCKTCGKTFKQKSHLNNHVESTHDGVTHSCDICEKTFTQKSSLKTHIDTVHNGVTHTCNTCGKSFTQKSNLKTHMDTAHNGVTHSCDICEKTFTQKSSLKTHIGTVHNGVTHTCNTCGKSFTQKSYLKTHIGTAHNGVTHACDICRKKFSSKSNLIIHIDTVHNSVRQKCDVCGKKFTSKSYLKTHIISAHDGVKHACDICGKTFKGKDTLQIHVDSVHKKISHACNL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482923;
- 90% Identity
- iTF_01482923;
- 80% Identity
- iTF_01482923;