Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000002.1:4210846-4212205[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 5.9e-05 0.012 16.4 1.2 18 44 198 221 182 221 0.85

2 7 0.00019 0.037 14.8 1.4 19 44 227 249 224 249 0.94

3 7 0.015 2.9 8.7 1.1 18 44 254 277 251 277 0.90

4 7 0.00061 0.12 13.2 0.2 19 43 283 304 278 305 0.91

5 7 0.44 87 4.0 1.5 19 29 311 321 308 337 0.79

6 7 0.65 1.3e+02 3.5 2.4 18 44 338 361 327 361 0.90

7 7 2 4e+02 1.9 0.1 19 27 388 396 373 402 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	5.9e-05	0.012	16.4	1.2	18	44	198	221	182	221	0.85
2	7	0.00019	0.037	14.8	1.4	19	44	227	249	224	249	0.94
3	7	0.015	2.9	8.7	1.1	18	44	254	277	251	277	0.90
4	7	0.00061	0.12	13.2	0.2	19	43	283	304	278	305	0.91
5	7	0.44	87	4.0	1.5	19	29	311	321	308	337	0.79
6	7	0.65	1.3e+02	3.5	2.4	18	44	338	361	327	361	0.90
7	7	2	4e+02	1.9	0.1	19	27	388	396	373	402	0.86

Sequence Information

Coding Sequence: ATGGAATCCAGCGATATACTTGATCGCGCTGTcagAGTGAAAGAGGAGCCAATCGATGCATCGATGATTGAACCCGATCTGAAAAACTTGCAACTCTTGCCATTTCAGCGAGAAAATTCAgACCATATCATACGAAAATGTGGCGTCAATCGCGAGAATAAACTCGGTGACGAAGTGGAAATAATTGTTGAGTGCGAAGACTTCAAACCcaacattaatttattaacaGTTAAAACAATTGACGATGATTCACGAAATCGCtttagaaatataaaaaatagcgATGGTTCTGAAACTCAGAATAACATTGAAATAGAAACTACGGGGGAAGTGACACAAGAATTTTTAGGCGACGTCACCGAAGATGTAGATTTGAATTTCGACCGTGCACTCGTcgaacgaaataaaaaaagaagaattacaaaaaagttGAACGATGAACTCAACCTCAAAACACACATTGGTAAGGTGCATGAAGCATCGTTTCATCGAGGCATCACCCATTCGTGTGACGTACGCGGCAAGAAATATTCGCTGAATTGTAATCTCCAGACCCACATCGATGCGGTGCACAATGACACGATCACGACCGCGTGTGAAatatgcggaaagaaataTTCGAGTAAGCGTAATCTTAAAGATCACATCGATACGGCGCACAACGGTGTAATCCATTCGTGTGACGTGTGTGGAAAGAAATTATCAAACAAGAGTAATCTGAAGACGCACATCGACACGGTGCATAGCGGTGTCAAACACGCGTGTGACTTATGCGGAAACGAATACGCAAGCAAGAATAGTTTAAGAAGACACGTTCTATCGGCGCATCGAAGTGCCACATGCCCGTGTGATTTTTGCGGCAAGAAATTCTCGATTACCAGTAATCTCAAAGTACACGTCGACGCGGTGCACAACGGTATCAGACACGCGTGTAATATTTGCGcaaagacattttcacaaagATATCATCTCAAGATCCACAAAGATTCGGTGCACAATGGAGTCAAacatgcatgcgacaaatgcggaAAATCATTTGCACACAAATATAGACTCAAATCGCACGTCGATACGGCACATAATCGTATCACGCATACACGCGATGGATGCAGAAAGAAGTTTCCAAGTAAGAGGAATCTGAACTGGCACGTCAAATCAGGGTGCAACGCGTGCGAAAAGACATTCGTACACGAAAGGATCATCTCCAAATAG
Protein Sequence: MESSDILDRAVRVKEEPIDASMIEPDLKNLQLLPFQRENSDHIIRKCGVNRENKLGDEVEIIVECEDFKPNINLLTVKTIDDDSRNRFRNIKNSDGSETQNNIEIETTGEVTQEFLGDVTEDVDLNFDRALVERNKKRRITKKLNDELNLKTHIGKVHEASFHRGITHSCDVRGKKYSLNCNLQTHIDAVHNDTITTACEICGKKYSSKRNLKDHIDTAHNGVIHSCDVCGKKLSNKSNLKTHIDTVHSGVKHACDLCGNEYASKNSLRRHVLSAHRSATCPCDFCGKKFSITSNLKVHVDAVHNGIRHACNICAKTFSQRYHLKIHKDSVHNGVKHACDKCGKSFAHKYRLKSHVDTAHNRITHTRDGCRKKFPSKRNLNWHVKSGCNACEKTFVHERIISK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01483167;
90% Identity: iTF_01483167;
80% Identity: iTF_01483167;