Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000050.1:467099-468211[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.073 14 6.5 3.2 18 30 63 82 50 90 0.77

2 11 1.6 3.1e+02 2.2 1.5 19 29 92 102 88 118 0.76

3 11 0.0028 0.55 11.1 3.9 17 44 118 142 107 142 0.90

4 11 0.014 2.7 8.8 0.1 19 32 148 163 145 170 0.82

5 11 0.026 5.1 8.0 0.6 19 44 176 198 168 198 0.92

6 11 0.0014 0.28 12.0 0.6 19 44 204 226 201 226 0.89

7 11 0.019 3.8 8.4 4.3 15 44 228 254 226 254 0.92

8 11 8.2 1.6e+03 -0.0 0.5 19 43 260 281 255 282 0.66

9 11 0.00079 0.16 12.8 2.2 18 44 287 310 282 310 0.93

10 11 4.6 9.1e+02 0.8 0.5 19 43 316 337 313 341 0.80

11 11 0.0011 0.22 12.3 1.5 18 43 343 365 326 366 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.073	14	6.5	3.2	18	30	63	82	50	90	0.77
2	11	1.6	3.1e+02	2.2	1.5	19	29	92	102	88	118	0.76
3	11	0.0028	0.55	11.1	3.9	17	44	118	142	107	142	0.90
4	11	0.014	2.7	8.8	0.1	19	32	148	163	145	170	0.82
5	11	0.026	5.1	8.0	0.6	19	44	176	198	168	198	0.92
6	11	0.0014	0.28	12.0	0.6	19	44	204	226	201	226	0.89
7	11	0.019	3.8	8.4	4.3	15	44	228	254	226	254	0.92
8	11	8.2	1.6e+03	-0.0	0.5	19	43	260	281	255	282	0.66
9	11	0.00079	0.16	12.8	2.2	18	44	287	310	282	310	0.93
10	11	4.6	9.1e+02	0.8	0.5	19	43	316	337	313	341	0.80
11	11	0.0011	0.22	12.3	1.5	18	43	343	365	326	366	0.86

Sequence Information

Coding Sequence: ATGGATGGCGATACAATTCaaaacacaattaaaaaagaaccCGGGGAGGAAGTGAAACAAGAAATTGTTGGTAATGCTGAAGAGGAATTGAATTTCGACTGTGAACTTATgattacaaaaaagtttaacaaAGAACATAACCTTGAACCACACATCGGCATGGTGCATACTACAACCCACACTCATTCATGCAATATTTGCAGCAAGACATTTTCTAGTAAATTTATTCTCCAAACCCATACCCATTcggtgcacaatggtgtcactcACTCATGTGACATTTGCGGCAAGTCATTCACTCAAAAAGGtcatctcaaaattcacatcgaTTCGATTCACAATGGCGTCAAACattcatgtgatatttgcggcaAGACGTATAATGGAAAGAAGAAACTTAATAGTCACATTAAATCAGCGCATAATGGTGTCACCTactcatgtgatatttgcggaaagaaattttcacgaaaagaTGTTCTTGAAACCCACATCGATGGAATACATAATGGTGTTATTCACTCATGCGATAGTTGTGGCAAGATGTTTAAAAAGAAGAGTGATCTGACGAGGCACGTTCAATCAGCGCATAATGGTGTCACCTACTCATGTGGTATTTGCGGCAAGACATTTACTCAGAAAGGTAGTCTCAAAACCCACATCGAATCGAGGCATAATGGGACTAAACATACGTGCAGTACATGTGGAAAGACGTTTACACATAAAAGTAGTcttaaaaaacacatcgattcaGTGCACAATAGGATCAAACATGCATGTGATAATTGTGGCAAGACGTTTATCCAAAATGGTTATCTCAAAATACATATTGTTACGGCGCACAATGATGTAACACATACATGTTATatatgtggaaaaaaattctcagcAAAGTCAAGcctcaaaaaacacatcaaTAAGGTGCACAATAGAATCGCTTATGCATGCCAAGTATGCCAAAAGTCGTTCACAACTAAAAGTTATCTCCAAATCCACATTAATGCGAGACATAATAATAGCACTGACTCTTGTGATATTTGTggcaaaacattttcatatcagaaaaatcttaaaaccCACTTCGATTCTGTACATCATATACTCATAGATTAG
Protein Sequence: MDGDTIQNTIKKEPGEEVKQEIVGNAEEELNFDCELMITKKFNKEHNLEPHIGMVHTTTHTHSCNICSKTFSSKFILQTHTHSVHNGVTHSCDICGKSFTQKGHLKIHIDSIHNGVKHSCDICGKTYNGKKKLNSHIKSAHNGVTYSCDICGKKFSRKDVLETHIDGIHNGVIHSCDSCGKMFKKKSDLTRHVQSAHNGVTYSCGICGKTFTQKGSLKTHIESRHNGTKHTCSTCGKTFTHKSSLKKHIDSVHNRIKHACDNCGKTFIQNGYLKIHIVTAHNDVTHTCYICGKKFSAKSSLKKHINKVHNRIAYACQVCQKSFTTKSYLQIHINARHNNSTDSCDICGKTFSYQKNLKTHFDSVHHILID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482856;
90% Identity: iTF_01482856;
80% Identity: iTF_01482856;