Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000002.1:6915239-6916479[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 7 0.054 11 7.0 1.0 15 44 169 195 157 195 0.86

2 7 0.0017 0.33 11.8 1.8 19 43 201 222 199 227 0.85

3 7 0.016 3.1 8.7 2.2 4 29 215 239 213 250 0.76

4 7 0.0011 0.23 12.3 2.9 17 44 255 279 242 279 0.92

5 7 0.18 35 5.3 1.1 17 29 283 295 281 306 0.78

6 7 2.7e-05 0.0053 17.5 0.1 17 44 307 331 304 331 0.95

7 7 3 5.9e+02 1.4 0.1 34 44 349 359 345 359 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	7	0.054	11	7.0	1.0	15	44	169	195	157	195	0.86
2	7	0.0017	0.33	11.8	1.8	19	43	201	222	199	227	0.85
3	7	0.016	3.1	8.7	2.2	4	29	215	239	213	250	0.76
4	7	0.0011	0.23	12.3	2.9	17	44	255	279	242	279	0.92
5	7	0.18	35	5.3	1.1	17	29	283	295	281	306	0.78
6	7	2.7e-05	0.0053	17.5	0.1	17	44	307	331	304	331	0.95
7	7	3	5.9e+02	1.4	0.1	34	44	349	359	345	359	0.93

Sequence Information

Coding Sequence: ATGGACCTCATTGGTTTATTTAACTGTGGTGCCagAGTAAAAGAAGAACCTTCTGACATCCCGACTactgaaaataattgtgaAGTGAATGACGAGAAACccaatttcataaactttcaACTGTTACCAATTTCACgagaaaattcaACCCATGGGTTTCGAAAATGTGACGTAAATCAAGAAACTGAACTCAGCAACGAAATAGAAATTGTATTTGAATGTGAAGACGTCAAGcccaaaattgatttattcattgttgaaaaagttgaaaattattctccAAATCATTTGCAGAATGTAAAAGATGACGACGTTTATAAAAGCcaaaacattattaaaatggAACCTGCGGATGAAGTGAAACAAGAATTTTTTAGTGACAACGCagaacaattaaaattgaatttagaCTGTAAAGttgaacaaaagaaaaaagggaatattaagaaaaagtttaacaaaaaacctaacctcaaaacacaCATTGGTGCTGGGCATAATAATACAAGCCCCTCATGCGATACATGCGGCAAGACATTTTCACAACAACGCACTCTTAAATTTCACATTAATTCAGTACATAGTGGTATCACACACGCGTGTAATATTTGCGGCAAGAAATACTCACAAAAAGGTACTCTCAAAAAACACTTTgattcagtgcataatggtatcacacatacatgtgacatttgtggaaagacattttcaTACAAATATGATCTTAAAGCTCACACGGATACAGTACACATTGGTATCGCATTTGTGTGTGATATTTGCGGCAAGAAATGTTCACTaaaaagtaatctcaaaaaacacattgattcagtgcataatggTGTAAAACATACATGTCTTAAatgcggaaagacattttcaCTCAAAACCCACATTGATTCATTACACAATGGTATCACAAttacatgtgatatttgtgggAAGACATTTCCATATAAAAGTAACctaaaaaaacacattgattcagtgcataatggtatcacaCCTACATGTGACATTTATGGAAAGAAATGTTTACTAAAAGGTAATCTCACAAAACACATTTATTCagtgcataatggtatcaaaAAGTCATAA
Protein Sequence: MDLIGLFNCGARVKEEPSDIPTTENNCEVNDEKPNFINFQLLPISRENSTHGFRKCDVNQETELSNEIEIVFECEDVKPKIDLFIVEKVENYSPNHLQNVKDDDVYKSQNIIKMEPADEVKQEFFSDNAEQLKLNLDCKVEQKKKGNIKKKFNKKPNLKTHIGAGHNNTSPSCDTCGKTFSQQRTLKFHINSVHSGITHACNICGKKYSQKGTLKKHFDSVHNGITHTCDICGKTFSYKYDLKAHTDTVHIGIAFVCDICGKKCSLKSNLKKHIDSVHNGVKHTCLKCGKTFSLKTHIDSLHNGITITCDICGKTFPYKSNLKKHIDSVHNGITPTCDIYGKKCLLKGNLTKHIYSVHNGIKKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01483127;
90% Identity: iTF_01483127;
80% Identity: iTF_01483127;