Tden009828.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000031.1:1354446-1355859[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.00023 0.046 14.5 0.8 16 44 170 195 157 195 0.88 2 9 0.058 11 6.9 2.2 19 43 201 222 199 223 0.82 3 9 0.00083 0.16 12.8 0.3 19 44 229 251 226 251 0.93 4 9 0.0069 1.4 9.8 1.9 19 44 257 279 254 279 0.94 5 9 0.13 25 5.8 3.1 19 43 285 306 282 307 0.94 6 9 0.00016 0.032 15.0 1.1 19 44 313 335 311 335 0.96 7 9 0.017 3.4 8.5 1.8 14 43 336 362 335 363 0.81 8 9 1.4 2.7e+02 2.5 0.9 18 41 368 388 365 395 0.79 9 9 0.12 23 5.9 3.0 18 33 396 408 384 421 0.77
Sequence Information
- Coding Sequence
- ATGATACTTTCAGCGAGTAAGATGGAATCGAGCAATTTATTCAATCCTGCTAttagAGTGAAAGAAGAGCCTCGTGATGAGCCGCTCAATGATAATGATTATGAAATGATTGACACGACACTTTCAGTTACTCAAAATGTTAAATGCGAAAGGTCTTGGCATGAAAATTCAgcccAAGAGCTTCTTCAAGAATATGacgaaaatcatgaaaatgaacttGACGACCTGGAAATCGAAATGGAATGTACAGACATGAAGCCCAATTTATTATTAGTTGCGAAAATTGAAGATTGTTCTAAAAATCAGCAGGATAGCGATGAGTATAAAACAGGAAACTTAGTTAAATTAGAAACCGTCGGGACAGCGAAGAAAGAAATATTTGGCGAAGAAGCCACTGAATTGAATTTCGGACGTGAactcaacgaaaaaaaagagaaagagtgtgTGGAAAAATCGAACTATAAGAAGAGTCTCAAAGCACACGTGGGTATGGTGCGAAGTGGTATCAACAatacatgtgatatatgccaaaagacattctcagACAAGAGTAATCTTAGAAAGCACACCGAATCGATGCATAATGGTGTTTTACATGACTGTGATATTTGTGGAAAAACATACTCACAAAAGAGTCATCTTAATGCTCACATTAAAGCGATTCACAATGGTGTCAGACCTGCATgcgatatttgcggaaagacatACTCAGTCAAGAGTactctcaaaaaacacatcgattcgTTACATCGTAAAATCACGCATCCGTGcgatatatgccaaaagacattctcaaACAAGAGTAATGTAAAACTACACATCAATTCGATGCATAATGGTGTTagacatgcatgtgatatatgcggaAATAAATTCACGACGAAAAGTAGACTTAAAGTTCACATCGAGTCGGTACATTGTAAAATCACGCAACTATGTaatatatgccaaaagacGTATTCAGACAAGAGTAGCCTCAAGAAACATATAAATACAGTGCACAAAAATACTAAACGAACGTGTAACATCTGCGAAAAGTCTTTTACTCAAAATCGTAGTCTCAAAGTTCACAtcgattcagtgcataatggTGTCAGATATGAATGCGATGTTTGCGGAAAATCTTTGGTTCAAAAATATCATCTCAAAAGACACATCGATGCGATACACAATGGTATTACCCACACGTGCGAAATATGTGGTAAGTCATTTTCACGAAAGAATTATCTTAAAATGCACGTCGATATGACTCATCGTTTACGCATGACTTGA
- Protein Sequence
- MILSASKMESSNLFNPAIRVKEEPRDEPLNDNDYEMIDTTLSVTQNVKCERSWHENSAQELLQEYDENHENELDDLEIEMECTDMKPNLLLVAKIEDCSKNQQDSDEYKTGNLVKLETVGTAKKEIFGEEATELNFGRELNEKKEKECVEKSNYKKSLKAHVGMVRSGINNTCDICQKTFSDKSNLRKHTESMHNGVLHDCDICGKTYSQKSHLNAHIKAIHNGVRPACDICGKTYSVKSTLKKHIDSLHRKITHPCDICQKTFSNKSNVKLHINSMHNGVRHACDICGNKFTTKSRLKVHIESVHCKITQLCNICQKTYSDKSSLKKHINTVHKNTKRTCNICEKSFTQNRSLKVHIDSVHNGVRYECDVCGKSLVQKYHLKRHIDAIHNGITHTCEICGKSFSRKNYLKMHVDMTHRLRMT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482895;
- 90% Identity
- iTF_01482895;
- 80% Identity
- iTF_01482895;