Tden019698.2
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000101.1:142065-143765[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.1 21 6.0 2.9 18 43 158 180 150 181 0.92 2 13 0.027 5.3 7.9 0.9 19 38 187 203 184 209 0.73 3 13 0.033 6.6 7.6 0.0 19 44 215 237 211 237 0.93 4 13 0.2 40 5.1 3.5 18 43 242 264 239 265 0.92 5 13 0.0088 1.7 9.5 1.4 19 44 271 293 268 293 0.94 6 13 0.0012 0.24 12.2 0.9 18 44 298 321 295 321 0.93 7 13 0.0016 0.31 11.9 0.2 19 43 327 348 323 349 0.92 8 13 0.22 43 5.0 1.0 19 43 355 376 352 377 0.89 9 13 0.00033 0.065 14.0 1.7 18 44 382 405 380 405 0.94 10 13 0.21 41 5.1 0.2 19 43 411 432 407 433 0.86 11 13 2.6 5.1e+02 1.6 2.8 17 30 437 450 424 461 0.72 12 13 2.6 5.1e+02 1.6 2.8 18 33 466 481 455 489 0.78 13 13 0.041 8.1 7.3 2.9 17 44 493 517 480 517 0.84
Sequence Information
- Coding Sequence
- ATGGAATCGACCAGTGAGTTCAACTGTGCCGCGagAATTAAGAAGGAGCCTGCTGACGAGTCATTTACTGAAAATGATGAACATGGAGTAATTGGCCAGACATCTGGTACTCAACATTTTCAGTCCTCGAGATTTGAGCATGAAAATTCAATCCTTAGGCTTCAAGAGCGCGACGAAAATCATGGAATTGAACTGGACGATGTGGCAATTGAGTTTGAGTGTAGAGACCAGAAGCCAATGTTGAATTTCTTGGTGAAAATTGAAGATGATTCTCAAAACTATTCGCAGGATGTAAAATACAGTAGAAATTGGGCAACTACAAACGGTATTAAACAAGAAATTGAGAgcgaagtgaaaaaagaattttttgaagatgatgaaaaaaacttgGCAAAAAACGTCGATTGCGAATTTGATAGTGAGAAGGAGTCGAAAACAAACAATAATGCGACGGATAAAGGTGTTACTTATTCGTGTCATACATGTAAAAAGACATTTAGACATAAAAGAAATCTCAAACGTCATATCGGATCAGCGCACGAAGGTGTCAGACATGCATGTAATATATgcggaaaaaatttctcagCAAAATTTagtctcaaaatccacatcgattcagTGCACCATGGTGTCAAACATCCATGCGATATATGCGATGAGAAACTCTCAATAAACAGTAATCTCCAAGTCCATATCGATACGGCTCATAATAAAATGACACATAAATGCGATACATGCGGGAAGAAATTATCAACGAAGAGTCATCTGAAAGTCCACATCGAATCAACGCATGAAGGTATCATCTACCCATGTGATACATGcagaaagaaatttacacgaaAAAGTGATCTTAAAAGACACATACATTCGGTGCATAGTAAAATCGCCCATAAATGTGATACGTGCGAAAAGAATTTCACAgaaaagagtaatctcaaaagACACATCGATGGAGCCCATAACGGTAACACCTATGGATGTGATATctgcggaaagaaattctcaaGGAAAGaccttttaaaaaatcacatcgaATCAGCGCATGAAGGTATCATCCACCCATGTGATAcatgcaaaaagaaattcacaCAAAAGAGTCAACTCAAAAGACACATAGATTTggtgcataataaaatcgGCCATAAATGTGATACGTGCGAAAAGAATTTCACACGaaagagtaatctcaaaagACACATCGATGGAGCACATAACGGTAACACTTATGGATGTGATatgtgcggaaagaaattcacACAAAAGGCCTCTCTCAAAAGACACATAGATATGGTGCATGATAAAATAACCTATAATTGTGATatgtgcgaaaagaaattctcaaCGAAAGGTCATCTCAATGGACACATATATTCGGTGCATGATAAAATAACCTATAATTGTGATatgtgcgaaaagaaattcaaacAAAAGAGGTCTATCAAACACCATATCGATGTGGTGCACAAGAGTATTTTATACACATGTGATAGTTGTGGGAAAATCTTTCTTTATAAATGGACTCTTCGTCGGCACATTACATCAAATCACAGTATTTGA
- Protein Sequence
- MESTSEFNCAARIKKEPADESFTENDEHGVIGQTSGTQHFQSSRFEHENSILRLQERDENHGIELDDVAIEFECRDQKPMLNFLVKIEDDSQNYSQDVKYSRNWATTNGIKQEIESEVKKEFFEDDEKNLAKNVDCEFDSEKESKTNNNATDKGVTYSCHTCKKTFRHKRNLKRHIGSAHEGVRHACNICGKNFSAKFSLKIHIDSVHHGVKHPCDICDEKLSINSNLQVHIDTAHNKMTHKCDTCGKKLSTKSHLKVHIESTHEGIIYPCDTCRKKFTRKSDLKRHIHSVHSKIAHKCDTCEKNFTEKSNLKRHIDGAHNGNTYGCDICGKKFSRKDLLKNHIESAHEGIIHPCDTCKKKFTQKSQLKRHIDLVHNKIGHKCDTCEKNFTRKSNLKRHIDGAHNGNTYGCDMCGKKFTQKASLKRHIDMVHDKITYNCDMCEKKFSTKGHLNGHIYSVHDKITYNCDMCEKKFKQKRSIKHHIDVVHKSILYTCDSCGKIFLYKWTLRRHITSNHSI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482845;
- 90% Identity
- iTF_01482845;
- 80% Identity
- iTF_01482845;