Tden015810.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000069.1:848523-850076[-]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 12 0.024 4.7 8.1 1.1 15 44 152 178 139 178 0.84 2 12 2.7 5.4e+02 1.5 3.1 19 39 184 201 181 208 0.75 3 12 0.00035 0.068 14.0 1.9 18 43 211 233 197 234 0.90 4 12 0.00091 0.18 12.6 1.0 19 44 240 262 236 262 0.95 5 12 0.2 39 5.2 0.3 19 43 268 289 265 294 0.84 6 12 0.14 28 5.6 0.6 19 44 296 318 290 318 0.92 7 12 3.7 7.2e+02 1.1 1.0 19 43 324 345 320 346 0.82 8 12 0.0013 0.25 12.2 0.1 19 44 352 374 348 374 0.94 9 12 0.01 2 9.3 0.6 19 44 380 402 377 402 0.93 10 12 0.19 37 5.2 0.7 19 44 408 430 405 430 0.92 11 12 0.003 0.58 11.0 0.9 18 44 435 458 432 458 0.91 12 12 0.075 15 6.5 2.4 19 44 464 486 462 486 0.94
Sequence Information
- Coding Sequence
- ATGGAATCCAGTGGTTCATTCAACTGCGCTGTGagAGTGAAAGGGGAACCTAGTGACGAGTCCCGTAGTGAAAACAATTGGGAGATGGTGGATGAAAAACCCGATCTAGAAAACTATCAACCCCTTTCGCCAGAATTTAATGACGATGTGGAAATAGTCGTTGAATGCCAAGACGTCAAGCCCATCATTAATTCATTGGCAGTcaagaaaattgaagaagaCTCTAAAAATGTCTTGCAGAATATAAAGTACAGTGATGTTTATTCAACTCAAAACTTGATTAAAATGGAACCCACGGAGGAAGTACAACAGGAATTTTTTGGTGACACCGCACAAGAATCGAATTTGCATTTAGCCTGTAAACGTGgcgaacaaaataaaacaaaaaaaataacaaaagagTTGAACAACGAACGTAACCTCAAAAGACACCGAGGTACGGTGAATAATGCTACAAATTACGGATGTGAAACATGCGGAAAATATTTCTCAACTAAGAGCAATCTGGACAGGCATGTCATGTCAGTACATAGTAATATTACCTactcatgtgatatttgcggaaaaaaGTACAGACATAAGTATCATCTTAAAAGCCACATTGACGCAGTCCACATGGGTGTCACATATGCATGcgatatatgccaaaagacattctcaaACAAGAGTAATCTTAGAAatcacatcgattcggtgcatcaTAAAATCAGGCATCCATGTGATgtatgccaaaagacattctcagACAAGAGCAATCTTAGAAATCACATCAATTCGGTGCACAAAGGTGTTAGACATGCATGTGACATTTGCGGAAATGTTTTTAAACGAAGAGTTGATCTCAATAGACATATCGATTCAGTGCATCATAAAATAAGGCATCCATGTGATATATGCAAAAAGACATTCTTAGACAAGAGTAATCTCCAAAAACATATTGGTGCAATGCACAGTGGTGTCAGACATGCATGCGATGTTTGcagaaatgtttttaaacgAAGAGTTGATCTCAATAGACatatcgattcggtgcatcataaaataaggcctgcatgtgatatatgccaaaagacattctcagAGAAGAGTACTCTCAGAAATCACATAGATTCTGTGCATAATGGTGCCAGACATGCGTGCGATGTTTGCCAAAAAACATTCTCAGACAAGAGTACTCTCAGAAATCACATAGATTCTGTGCATAATGGTGCCAGACATGCGTGCGATGTTTGCCAAAAAACATTCTCAGACAAGAATTATCTCCGAAAACACATTGATTCAGTGCACAACGGTGTTAAACATtcatgtgatatatgccaaaagacattctcagACAAAAGTAATCTTAAAAAACACGTCGACTCGCTACATAATGGTATCACTCACGCATGTGATAcatgccaaaagacattctcacACAAAGctaatctcaaaaaacacatcgattcagtgcataatggGGTCATTCATGCATGTTAA
- Protein Sequence
- MESSGSFNCAVRVKGEPSDESRSENNWEMVDEKPDLENYQPLSPEFNDDVEIVVECQDVKPIINSLAVKKIEEDSKNVLQNIKYSDVYSTQNLIKMEPTEEVQQEFFGDTAQESNLHLACKRGEQNKTKKITKELNNERNLKRHRGTVNNATNYGCETCGKYFSTKSNLDRHVMSVHSNITYSCDICGKKYRHKYHLKSHIDAVHMGVTYACDICQKTFSNKSNLRNHIDSVHHKIRHPCDVCQKTFSDKSNLRNHINSVHKGVRHACDICGNVFKRRVDLNRHIDSVHHKIRHPCDICKKTFLDKSNLQKHIGAMHSGVRHACDVCRNVFKRRVDLNRHIDSVHHKIRPACDICQKTFSEKSTLRNHIDSVHNGARHACDVCQKTFSDKSTLRNHIDSVHNGARHACDVCQKTFSDKNYLRKHIDSVHNGVKHSCDICQKTFSDKSNLKKHVDSLHNGITHACDTCQKTFSHKANLKKHIDSVHNGVIHAC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482844;
- 90% Identity
- iTF_01482844;
- 80% Identity
- iTF_01482844;