Tden009678.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000031.1:208604-209911[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 9 0.32 62 4.5 0.4 24 44 141 162 140 162 0.76 2 9 0.00048 0.095 13.5 0.0 18 44 167 190 163 190 0.93 3 9 0.011 2.1 9.2 1.6 18 30 195 207 192 222 0.78 4 9 0.64 1.3e+02 3.5 0.2 19 43 224 245 221 250 0.73 5 9 0.0043 0.84 10.5 0.7 19 44 252 274 247 274 0.94 6 9 0.12 23 5.9 0.1 16 44 277 302 275 302 0.91 7 9 0.0017 0.34 11.7 1.1 18 44 307 330 306 330 0.93 8 9 0.037 7.3 7.5 2.3 19 43 336 357 333 362 0.78 9 9 0.0051 1 10.2 1.2 19 44 364 386 361 386 0.92
Sequence Information
- Coding Sequence
- ATGGAATCCAGTGACCATTGTATCagAGTGAAAGTGGAGCCTAGCGATGCACCAATCATTGATAGTGAAATCATTGATGAGAAACCCGATCTTAATAACTTCAAACTCTTACCACATCTACcagaaaattcaATCCCTACCGTTCGGAAATATGAAGGAAATCATGATATTGAACGTgatgataaattgaaaatagtttttgaatgCCAAGACGTCAAGCCCAACATTAATTTATCAGCAGTTCAGAAAATTGAAGATGATTCTCAAAATTACTTGCGAGATATCGAATATAGTGATGGttgtaaaaatcaaaacaaaattaaaatagaaccTGCGGTGGTAATAAAACAAGAAATCGTGGGTAATGCTGCAGAAGGATCGAATTTAAAGTCCGATCCTATACTTTTCaaacaaatagaaaaaagaattacaaaaaaactcAACACAGAtcgtaacctcaaaacacacATCGATTCGGCTCATCGTGATACACCGCCTACTTGTGATATATGCGGAAAAgcattttcaacaaaaggtaatctcaaaactcacatcgatTCGATGCACAACGGTATCAAACATGAGTGTAATGTGtgtggcaaaaaattttcacgaaagAGTTATGTCAAAATCCACATCAATGTGGTGCACAATGGTCTCACTCATCCATGCAATGTGTGTGGAAAGAAATTCTTTGGTACGGGTTATCTTAAAATCCACGTCGATACCGTACACAATGGCGTTAGACATGCATGTGACATTTGCGGAAAGAATTACTTTGAAAAGAGTAAACTCAAAAAACACGTCGATAGAAAACATAATGGTGTCAAACTTGAGTGTGATGTTTGCAGAAAGTCATTTTCCCTTGAAGCtaatctcaaaattcacatcgaTTCGATGCACAATGGTGTGCCACATACATGTGACATTTGTGGAAAAACATTCTCAGCGAAACGTAGTcttaaaaaacacatcgatacCGCGCATAATGGTGTTAGATACGCATGTAATACATGCGGAAAGAAAATCTCAACTAAGGATTATCTCAAAacccacatcgattcggtacaTAACTGTATCACTCACCCATGTGACATATGCGGAAAGATATTTACCCTGAAATTAAGCCTCAAACGTCACATTAATTCAAAGCACAGTGCTGATAAATAA
- Protein Sequence
- MESSDHCIRVKVEPSDAPIIDSEIIDEKPDLNNFKLLPHLPENSIPTVRKYEGNHDIERDDKLKIVFECQDVKPNINLSAVQKIEDDSQNYLRDIEYSDGCKNQNKIKIEPAVVIKQEIVGNAAEGSNLKSDPILFKQIEKRITKKLNTDRNLKTHIDSAHRDTPPTCDICGKAFSTKGNLKTHIDSMHNGIKHECNVCGKKFSRKSYVKIHINVVHNGLTHPCNVCGKKFFGTGYLKIHVDTVHNGVRHACDICGKNYFEKSKLKKHVDRKHNGVKLECDVCRKSFSLEANLKIHIDSMHNGVPHTCDICGKTFSAKRSLKKHIDTAHNGVRYACNTCGKKISTKDYLKTHIDSVHNCITHPCDICGKIFTLKLSLKRHINSKHSADK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01483026;
- 90% Identity
- iTF_01483026;
- 80% Identity
- iTF_01483026;