Basic Information

Insect: Trichogramma dendrolimi
Gene Symbol: -
Assembly: GCA_034770305.1
Location: JAPMIB010000085.1:742811-744800[-]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.13 26 5.7 0.8 19 43 167 193 164 194 0.74

2 14 0.0018 0.35 11.7 0.3 19 43 223 244 210 245 0.93

3 14 0.0008 0.16 12.8 0.5 19 44 251 273 248 273 0.95

4 14 0.023 4.5 8.1 0.5 19 44 307 329 304 329 0.94

5 14 0.00056 0.11 13.3 0.9 19 44 335 357 330 357 0.94

6 14 0.0056 1.1 10.1 0.6 18 44 362 385 360 385 0.93

7 14 0.0022 0.44 11.4 0.9 19 44 391 413 388 413 0.95

8 14 1.3 2.6e+02 2.5 3.6 19 44 419 441 416 441 0.85

9 14 0.43 84 4.1 0.3 19 33 447 461 444 473 0.82

10 14 0.00058 0.11 13.3 2.2 18 44 474 497 460 497 0.87

11 14 0.032 6.2 7.7 0.7 18 43 502 524 500 525 0.79

12 14 0.004 0.79 10.6 1.1 19 44 531 553 529 553 0.91

13 14 0.3 59 4.6 4.3 19 44 559 581 556 581 0.90

14 14 0.12 24 5.8 0.5 19 44 587 609 584 609 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.13	26	5.7	0.8	19	43	167	193	164	194	0.74
2	14	0.0018	0.35	11.7	0.3	19	43	223	244	210	245	0.93
3	14	0.0008	0.16	12.8	0.5	19	44	251	273	248	273	0.95
4	14	0.023	4.5	8.1	0.5	19	44	307	329	304	329	0.94
5	14	0.00056	0.11	13.3	0.9	19	44	335	357	330	357	0.94
6	14	0.0056	1.1	10.1	0.6	18	44	362	385	360	385	0.93
7	14	0.0022	0.44	11.4	0.9	19	44	391	413	388	413	0.95
8	14	1.3	2.6e+02	2.5	3.6	19	44	419	441	416	441	0.85
9	14	0.43	84	4.1	0.3	19	33	447	461	444	473	0.82
10	14	0.00058	0.11	13.3	2.2	18	44	474	497	460	497	0.87
11	14	0.032	6.2	7.7	0.7	18	43	502	524	500	525	0.79
12	14	0.004	0.79	10.6	1.1	19	44	531	553	529	553	0.91
13	14	0.3	59	4.6	4.3	19	44	559	581	556	581	0.90
14	14	0.12	24	5.8	0.5	19	44	587	609	584	609	0.91

Sequence Information

Coding Sequence: ATGGAATCGAGCAACGTATTCAATACTGGTGTTAGagtgaaaaaagaaccTTGTGATGAGCCTctcaatgataataatgattatgaaataattgacACTACACCCGTTactcaaaatattaaattcgaGATGTTTCGGCgagaaaattcaaacCAAATGCTTCAAGGATATGacgaaaatcatgaaaatgaacttGACGACTTGGAAATCGAAATTGAATGTACAGACATGAAGCCCAATTTATTGGCGGTTGCGAAAATTGAAGATTATTCTCCACATCAATGGGAGGATAGCGATGAGTATAAAACTggaagcaaaattaaattagaaacTGTCGGGACAGTGAAGAAAGAAATGTTAAGCGAAGAAGAAACTGATTTGAATTTCGGACGTGGACTCAGCGAACAAAATAAACAAGGAACTGTTTCCAAAGAGCTTAACTATGAACATAGGCTAAAAACTCACATTGATACTACGCATTATGGAATCACACATGCGTGTGATATTTGCGGCAATGTTTTTAAACGAAGAGGCGATCTCAAAACTCACGTCGAATCGGTGCATCTTAAAATAAGGCATGCATCCGATATTTgcgaaaagacattcacaTCAAAGTATTATCTCCAAAACCATATCGACGCAGTGCACGATGGAATCGGCTTCGCATGTGACGTATGCGGAAAGGCATTCTCAGACAAGAATAATCTTAGAAATCACATAGATTCGATGCATCATAAAATAAGGCATccatgtgatatatgccaaaagacattctcagataagagtaatctcaaaactcacatcgattcggtgcataatggtgTCAGACATGCATGTGACACTTGTGGAAAATCATTCAGACAAAAGAGTAATCGCAATAGGCACATAGATTCGGTGCATCGTCAAATCACGCATCCATGcgatatatgccaaaagacattctcaaAAAAAAGTGATCTTAATAggcacatcgattcggtgcataataaaGTCCGGCATGCATGcgatatatgccaaaagacattctcagacaagagtaatctcaaaaagcacatcgattcggtgcataattGTGTCACacatgaatgtgatatttgcggaaagacgttctcagaaaaaagaaatcttgGAAAACACATCGATTCTGAGCATAATGGTGTCAggcatgcatgtgatatatgccaaaagacattctcagacaagagtaatctcaaaataCATATCGAATCGGTGCACAAAGGTGTTAGTCATGCATGTGAAATTTGCGGGAAGAAGTTCATGCATAAAAACACTCTCAAAACCCACACCGAATCGGTGCACAAAGGTGTTAGACATGCATGCGATATTTGCGGAAATGTTTTTAAACGAAGAGGCGATATCAAAACTCACGTCGATTCGGTGCATCATAAAATTACGAATCCTTGTAATAAATGCCCAAAGACATTCTCAGACAAGAGTAATCTTAGAAAGCACATCTATTCGGTGCACAAAGGTGTCACacatgaatgtgatatttgcggaaagacgTTCACACGTAAAAATTATCTCCAAAAACATATCGACGCAGTGCACAATGGAATCGGCTTCGCATGTGACGTATGCGGAAAGAATTACACACGTAAAAATCATCTCAAAAGGCATATGGATGCGGAGCACAATGGAATCACCCACGCATGTGTTTTCtgtgaaaagaaatataaatatcaaactCATCTCAATAAACATGTCAAATCGTCTCATAATGGTATCATATATTCATGCGAGACATGTGGCAAGACATTCAGACAGAAAAGAAATCTCAGAGCTCACATCGATGTGGCGCATCGCTCACTCAATATGAcctaa
Protein Sequence: MESSNVFNTGVRVKKEPCDEPLNDNNDYEIIDTTPVTQNIKFEMFRRENSNQMLQGYDENHENELDDLEIEIECTDMKPNLLAVAKIEDYSPHQWEDSDEYKTGSKIKLETVGTVKKEMLSEEETDLNFGRGLSEQNKQGTVSKELNYEHRLKTHIDTTHYGITHACDICGNVFKRRGDLKTHVESVHLKIRHASDICEKTFTSKYYLQNHIDAVHDGIGFACDVCGKAFSDKNNLRNHIDSMHHKIRHPCDICQKTFSDKSNLKTHIDSVHNGVRHACDTCGKSFRQKSNRNRHIDSVHRQITHPCDICQKTFSKKSDLNRHIDSVHNKVRHACDICQKTFSDKSNLKKHIDSVHNCVTHECDICGKTFSEKRNLGKHIDSEHNGVRHACDICQKTFSDKSNLKIHIESVHKGVSHACEICGKKFMHKNTLKTHTESVHKGVRHACDICGNVFKRRGDIKTHVDSVHHKITNPCNKCPKTFSDKSNLRKHIYSVHKGVTHECDICGKTFTRKNYLQKHIDAVHNGIGFACDVCGKNYTRKNHLKRHMDAEHNGITHACVFCEKKYKYQTHLNKHVKSSHNGIIYSCETCGKTFRQKRNLRAHIDVAHRSLNMT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01482799;
90% Identity: iTF_01482799;
80% Identity: iTF_01482799;