Tden003708.1
Basic Information
- Insect
- Trichogramma dendrolimi
- Gene Symbol
- -
- Assembly
- GCA_034770305.1
- Location
- JAPMIB010000007.1:808626-809998[+]
Transcription Factor Domain
- TF Family
- zf-BED
- Domain
- zf-BED domain
- PFAM
- PF02892
- TF Group
- Zinc-Coordinating Group
- Description
- The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 7 0.00044 0.087 13.6 0.3 14 43 169 195 162 196 0.89 2 7 0.0004 0.078 13.8 0.5 18 43 201 223 199 224 0.95 3 7 0.12 23 5.9 0.7 18 30 229 241 226 252 0.75 4 7 0.35 69 4.4 1.3 18 34 257 270 248 280 0.78 5 7 8.6e-05 0.017 15.9 1.0 13 43 280 307 269 312 0.79 6 7 0.058 11 6.9 0.5 19 44 313 335 305 335 0.89 7 7 0.00056 0.11 13.3 1.6 18 44 340 363 338 363 0.94
Sequence Information
- Coding Sequence
- ATGGAATCCAGTGACTTTCTTAATTGTGCTTTCAGAATGAAAGAAGAACCTTTTGATGTATCGCTTATCGAAAATAATTACGAAATGATTGACGAAAAACCCAATCTTGAAACCTTCCAACCCTTACCGTTTCTGCGAGAAAATTCAATCGATACCCTTCGAAAATGTGACTTAAATCACAAAAGTGAATTTGATGAGAACGTGGAAATCGTTGCTGAATGTGAAGACTTCAAGCCCAACATTAGTTCATTAACAATTGAGAAAATTgataatgattttcaaaatcacttGCAAAATGTACGATGGAGCGACGATTGTAAAACtgaaaacataattaaaatagaaccCATGGATGAAGTTAAACAGGAATATTTTAATGGCGATGCTGaacaattgaatttgaatCTCGACTATGATTCTgtcaaacaaaataaaaaaagaagaattgcAAAAAAGTCTAAAAACGAATATAGACCCAAATCACACATCGTCGCTGGGAATAGCGATACAACCTATGCATGTGAAgtttgcggaaagaaattttcaagtaaggGTAATCTGAAAAGACATGTAGAATCATCACATCTTCGTATTACCCACACATGTGATGTATGTGGCAAGACATTTTCACTAAAAGAAAATCTCAAAAGACACATTGATTCGATGCACGATAATATTACCCATACGTGTGATATATGTGGCAAGACATTTACACAAAAAGGTCATCTCAAAGTCCACATCGATACGTCACACTATAGTGTCACTCATgtatgtgatatttgcggcaAGGCATTCAAACATAAGAGTAGTTTCAAGATCCACATCGATGCGATTCATAATGATATCAAATACACATGTGGTATTTGCGCAAAGATATTTGCACGAAAGAGTAATCTGAAAGCACACATCGATTGGGTGCATAATAGTGAACATTCATGTGATAgttgcggaaaaaaatttacagagAAAAGTAGTCTCAAAGTCCACATTGTTGCGAAGCATAGTGGCGTAACAcaaaaatgtgatatttgcggtaATAAATACACACGTAAATCTAGTCTTCAGAGGCACATTAGTACGGTGCACAATGGTACCATAGGTACATATGATGTATGTAGAAAGTCATTTACACAAgagaaaaatctcaaaaatcaaatcaatgcGATGCATAACGGATTCGTGTCGTATGAGTAA
- Protein Sequence
- MESSDFLNCAFRMKEEPFDVSLIENNYEMIDEKPNLETFQPLPFLRENSIDTLRKCDLNHKSEFDENVEIVAECEDFKPNISSLTIEKIDNDFQNHLQNVRWSDDCKTENIIKIEPMDEVKQEYFNGDAEQLNLNLDYDSVKQNKKRRIAKKSKNEYRPKSHIVAGNSDTTYACEVCGKKFSSKGNLKRHVESSHLRITHTCDVCGKTFSLKENLKRHIDSMHDNITHTCDICGKTFTQKGHLKVHIDTSHYSVTHVCDICGKAFKHKSSFKIHIDAIHNDIKYTCGICAKIFARKSNLKAHIDWVHNSEHSCDSCGKKFTEKSSLKVHIVAKHSGVTQKCDICGNKYTRKSSLQRHISTVHNGTIGTYDVCRKSFTQEKNLKNQINAMHNGFVSYE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01482981; iTF_01484888; iTF_01485367;
- 90% Identity
- iTF_01482981; iTF_01484888; iTF_01485367;
- 80% Identity
- iTF_01482981;